RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 KCND3Q9UK17 655 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 SLC12A4Q9UP95 1085 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 SIRT4Q9Y6E7 314 aaPredicted RBP4.31□□□□□ -1.72
PCM1-220ENST00000523896 AOX1Q06278 1338 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 CYP3A7-CYP3A51PA0A087WV96 503 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3DA0A087WVF3 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3IA0A087WXS9 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3EA0A087X179 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3KA0A087X1G2 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3BA6NDS4 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3FA6NER0 549 aaPredicted RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 MANSC4A6NHS7 340 aaPredicted RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3LB9A6J9 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 INO80B-WBP1J3KQ70 363 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 EIF3FO00303 357 aaPredicted RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 PRYO14603 147 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 NPHP1O15259 732 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 HEXIM1O94992 359 aaKnown RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 PRKCGP05129 697 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3HP0C7X1 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 CYP3A7P24462 503 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 HOXD12P35452 270 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 AGTR2P50052 363 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 FOXF2Q12947 444 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 SLC14A1Q13336 389 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 CERKLQ49MI3 558 aaPredicted RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 LRCH2Q5VUJ6 765 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3GQ6DHY5 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3CQ6IPX1 549 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 SYT13Q7L8C5 426 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 RASGRP2Q7LDG7 609 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 TBC1D3Q8IZP1 549 aaPredicted RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 SRFBP1Q8NEF9 429 aaKnown RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 CSGALNACT1Q8TDX6 532 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 PNISRQ8TF01 805 aaKnown RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 GOLGA1Q92805 767 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 ZNF845Q96IR2 970 aaPredicted RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 PIGSQ96S52 555 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 RRN3Q9NYV6 651 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 PGAP2Q9UHJ9 254 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 GJD2Q9UKL4 321 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 BAG5Q9UL15 447 aa4.3□□□□□ -1.72
PCM1-220ENST00000523896 LRRFIP2Q9Y608 721 aaKnown RBP4.3□□□□□ -1.72
PCM1-220ENST00000523896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.29□□□□□ -1.72
PCM1-220ENST00000523896 AGAP5A6NIR3 686 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 SMIM22K7EJ46 135 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 NCAM2O15394 837 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 HNRNPRO43390 633 aaKnown RBP4.29□□□□□ -1.72
PCM1-220ENST00000523896 KRT38O76015 456 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 KAT7O95251 611 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 NHLRC4P0CG21 123 aaPredicted RBP4.29□□□□□ -1.72
PCM1-220ENST00000523896 STAT6P42226 847 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 RCAN1P53805 252 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 PROK1P58294 105 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 TFF2Q03403 129 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 TAF12Q16514 161 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 FAM110CQ1W6H9 321 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 GLE1Q53GS7 698 aaKnown RBP4.29□□□□□ -1.72
PCM1-220ENST00000523896 PRAMEF17Q5VTA0 474 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 SLC39A5Q6ZMH5 540 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 LRRTM4Q86VH4 590 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 CHSY1Q86X52 802 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 TMEM57Q8N5G2 664 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
PCM1-220ENST00000523896 ADPRHL1Q8NDY3 354 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 HERVK_113Q902F9 699 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 KTI12Q96EK9 354 aaPredicted RBP4.29□□□□□ -1.72
PCM1-220ENST00000523896 P2RY11Q96G91 374 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 SENP7Q9BQF6 1050 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 NUAK2Q9H093 628 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 RNF7Q9UBF6 113 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 MAFFQ9ULX9 164 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 DERAQ9Y315 318 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 PCDHA10Q9Y5I2 948 aa4.29□□□□□ -1.72
PCM1-220ENST00000523896 COPG1Q9Y678 874 aaKnown RBP4.29□□□□□ -1.72
PCM1-220ENST00000523896 SPATA31A5Q5VU36 1347 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 SPATA31A7Q8IWB4 1347 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 DNAJC9-AS1A6NH13 148 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 LINC01548A6NM66 108 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 C16orf96A6NNT2 1141 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 TISP43B9A030 160 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 TMEM232C9JQI7 657 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 SEPT4O43236 478 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 CNPP09543 421 aaKnown RBP4.28□□□□□ -1.72
PCM1-220ENST00000523896 CYP2D6P10635 497 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 CKMT1AP12532 417 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 PEPDP12955 493 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 MAPK9P45984 424 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 PCP4P48539 62 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 ZNF81P51508 661 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 ZNF84P51523 738 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 RBM5P52756 815 aaKnown RBP eCLIP4.28□□□□□ -1.72
PCM1-220ENST00000523896 SLC37A1P57057 533 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 TUBA4AP68366 448 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 DMWDQ09019 674 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 PDCLQ13371 301 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 PFKFB3Q16875 520 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms