RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	ENG	P17813	658 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	COPB2	P35606	906 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	KCNJ5	P48544	419 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	PRKG2	Q13237	762 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	CCDC96	Q2M329	555 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	KHDC1L	Q5JSQ8	128 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	PLAC9	Q5JTB6	97 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	PDXDC1	Q6P996	788 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	C4orf50	Q6ZRC1	276 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	TOM1L2	Q6ZVM7	507 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	SMIM5	Q71RC9	77 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	LRRTM4	Q86VH4	590 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	ZNF280B	Q86YH2	543 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	PCYOX1L	Q8NBM8	494 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	SEMA6D	Q8NFY4	1073 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	STT3B	Q8TCJ2	826 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	ATRIP	Q8WXE1	791 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	ATG4A	Q8WYN0	398 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	GLG1	Q92896	1179 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	P2RX7	Q99572	595 aa	Known RBP	5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	FAM167B	Q9BTA0	163 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	QTRT1	Q9BXR0	403 aa	Known RBP	5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	SIK2	Q9H0K1	926 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	SACM1L	Q9NTJ5	587 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	MAN2B2	Q9Y2E5	1009 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	QSER1	Q2KHR3	1735 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	GPRASP1	Q5JY77	1395 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	ANKRD30B	Q9BXX2	1392 aa		5.28	□□□□□ -1.56
SREK1-213	ENST00000523655	SZT2	Q5T011	3432 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	PASK	Q96RG2	1323 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	TRIM38	O00635	465 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	TP73	O15350	636 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	THAP12	O43422	761 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	SOAT2	O75908	522 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	PDE8B	O95263	885 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	VNN1	O95497	513 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	MT-ND5	P03915	603 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	GRP	P07492	148 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	CYP2D6	P10635	497 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	RRM1	P23921	792 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	CNTF	P26441	200 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	USP6	P35125	1406 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	RPS16	P62249	146 aa	Known RBP	5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	CYP4F2	P78329	520 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	CRB1	P82279	1406 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	FAM110C	Q1W6H9	321 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	PROSER3	Q2NL68	480 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	ZIK1	Q3SY52	487 aa	Predicted RBP	5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	MTX3	Q5HYI7	312 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	EMC10	Q5UCC4	262 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	SPATA1	Q5VX52	437 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	ZNF626	Q68DY1	528 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	C1QL2	Q7Z5L3	287 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	KRT77	Q7Z794	578 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	DTX2	Q86UW9	622 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	MOGAT3	Q86VF5	341 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	FAM71B	Q8TC56	605 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	SPPL3	Q8TCT6	385 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	SCARB1	Q8WTV0	552 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	SMG7	Q92540	1137 aa	Known RBP	5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	MAML1	Q92585	1016 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	R3HDM4	Q96D70	268 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	SNX22	Q96L94	193 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	STK31	Q9BXU1	1019 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	SMURF2	Q9HAU4	748 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	TMEM8A	Q9HCN3	771 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	FMN2	Q9NZ56	1722 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	ZNF70	Q9UC06	446 aa	Predicted RBP	5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	AFG3L2	Q9Y4W6	797 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	CASP8AP2	Q9UKL3	1982 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	MEGF6	O75095	1541 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	PLEKHH1	Q9ULM0	1364 aa		5.27	□□□□□ -1.57
SREK1-213	ENST00000523655	EEA1	Q15075	1411 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655		A6NLC8	198 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	AQP12B	A6NM10	295 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	HOXC11	O43248	304 aa	Predicted RBP	5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	ITGA5	P08648	1049 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	PRR35	P0CG20	571 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	ADORA2A	P29274	412 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	KRT9	P35527	623 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	PXN	P49023	591 aa	Predicted RBP	5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	PDE1A	P54750	535 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	UCP3	P55916	312 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	NUCB1	Q02818	461 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	EFR3A	Q14156	821 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	IQCB1	Q15051	598 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	SUPT20HL1	Q3ZLR7	823 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	CEP78	Q5JTW2	689 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	PCID2	Q5JVF3	399 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	EPHA10	Q5JZY3	1008 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	GPATCH4	Q5T3I0	446 aa	Known RBP	5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	ZNF618	Q5T7W0	954 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	LIN54	Q6MZP7	749 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	LAYN	Q6UX15	382 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	OR6B3	Q8NGW1	331 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	HERVK_113	Q902F9	699 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	EID2B	Q96D98	161 aa		5.26	□□□□□ -1.57
SREK1-213	ENST00000523655	SNX27	Q96L92	541 aa		5.26	□□□□□ -1.57

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