RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 TMEM74BQ9NUR3 256 aa16.83■□□□□ 0.28
CLN8-206ENST00000523237 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.28
CLN8-206ENST00000523237 PILRBQ9UKJ0 227 aa16.83■□□□□ 0.28
CLN8-206ENST00000523237 ATXN2Q99700 1313 aaKnown RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 TM4SF5O14894 197 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 DLDP09622 509 aaKnown RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 SLC2A3P11169 496 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 POLR2EP19388 210 aaKnown RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 CD6P30203 668 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 CD70P32970 193 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 RPS24P62847 133 aaKnown RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 IRX4P78413 519 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 LMAN2Q12907 356 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 CDH18Q13634 790 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 ZC3H12AQ5D1E8 599 aaKnown RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 PEAR1Q5VY43 1037 aaPredicted RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 OR6B2Q6IFH4 312 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 RBM43Q6ZSC3 357 aaKnown RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 C11orf57Q6ZUT1 292 aaPredicted RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 FAM183BPQ6ZVS7 135 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 RABEPKQ7Z6M1 372 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 DEFB106AQ8N104 65 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 CARNMT1Q8N4J0 409 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 ATP6V0D2Q8N8Y2 350 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 CEP76Q8TAP6 659 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 CYB5D2Q8WUJ1 264 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 HSPA12BQ96MM6 686 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 SLC2A13Q96QE2 648 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 PDCL3Q9H2J4 239 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 FAM204AQ9H8W3 233 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 CD93Q9NPY3 652 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 TMEM9BQ9NQ34 198 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 ITM2CQ9NQX7 267 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLN8-206ENST00000523237 USP36Q9P275 1121 aaKnown RBP16.82■□□□□ 0.28
CLN8-206ENST00000523237 FHOD1Q9Y613 1164 aa16.82■□□□□ 0.28
CLN8-206ENST00000523237 C4orf47A7E2U8 309 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 TPM2P07951 284 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 ACADMP11310 421 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 HLA-EP13747 358 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 UCHL3P15374 230 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 ABCB4P21439 1286 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 KCNA4P22459 653 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 COPAP53621 1224 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 PITX1P78337 314 aaPredicted RBP16.81■□□□□ 0.28
CLN8-206ENST00000523237 EIF4EBP2Q13542 120 aaPredicted RBP16.81■□□□□ 0.28
CLN8-206ENST00000523237 CAMK2GQ13555 558 aaPredicted RBP16.81■□□□□ 0.28
CLN8-206ENST00000523237 DUOXA1Q1HG43 343 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 PTPN20Q4JDL3 420 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 DAB2IPQ5VWQ8 1189 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 SLC23A3Q6PIS1 610 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 OLFML1Q6UWY5 402 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 CHSY1Q86X52 802 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 LGI2Q8N0V4 545 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 TMEM35BQ8NCS4 154 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 OR2T3Q8NH03 318 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 FOXJ1Q92949 421 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 MYEOVQ96EZ4 313 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 ZNF419Q96HQ0 510 aaPredicted RBP16.81■□□□□ 0.28
CLN8-206ENST00000523237 LSM14BQ9BX40 385 aaKnown RBP16.81■□□□□ 0.28
CLN8-206ENST00000523237 PLCB1Q9NQ66 1216 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 DDIT4Q9NX09 232 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 TAB2Q9NYJ8 693 aa16.81■□□□□ 0.28
CLN8-206ENST00000523237 XPO7Q9UIA9 1087 aaKnown RBP16.81■□□□□ 0.28
CLN8-206ENST00000523237 ADAMTS9Q9P2N4 1935 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 GON4LQ3T8J9 2241 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 SYNJ2BP-COX16A0A087WUM0 186 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 KCNU1A8MYU2 1149 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 H0Y626 953 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 GRAP2O75791 330 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 LUC7L3O95232 432 aaKnown RBP16.8■□□□□ 0.28
CLN8-206ENST00000523237 ERBB2P04626 1255 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 CFIP05156 583 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 CYP11B1P15538 503 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 TACR2P21452 398 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 OXTRP30559 389 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 CCR1P32246 355 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 TPMTP51580 245 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 SLC6A3Q01959 620 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 PTPRNQ16849 979 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 SYCP2LQ5T4T6 812 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 RAP1GAP2Q684P5 730 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 SLC26A9Q7LBE3 791 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 ZDHHC17Q8IUH5 632 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 SLC41A1Q8IVJ1 513 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 CFAP52Q8N1V2 620 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 RNF34Q969K3 372 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 TOE1Q96GM8 510 aaKnown RBP16.8■□□□□ 0.28
CLN8-206ENST00000523237 LMLNQ96KR4 655 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 NAA15Q9BXJ9 866 aaKnown RBP16.8■□□□□ 0.28
CLN8-206ENST00000523237 FBRSQ9HAH7 460 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 WSB2Q9NYS7 404 aaPredicted RBP16.8■□□□□ 0.28
CLN8-206ENST00000523237 COX16Q9P0S2 106 aa16.8■□□□□ 0.28
CLN8-206ENST00000523237 F5H5T6 163 aa16.79■□□□□ 0.28
CLN8-206ENST00000523237 CDX4O14627 284 aaPredicted RBP16.79■□□□□ 0.28
CLN8-206ENST00000523237 DAB1O75553 588 aa16.79■□□□□ 0.28
CLN8-206ENST00000523237 MOCS3O95396 460 aa16.79■□□□□ 0.28
CLN8-206ENST00000523237 IGLV3-19P01714 112 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms