RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ASB3Q9Y575 518 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 NUB1Q9Y5A7 615 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 CCDC196A0A1B0GTZ2 297 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 NUDT19A8MXV4 375 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 SGK1O00141 431 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 FFAR3O14843 346 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 PRAMEF1O95521 474 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 HMGA1P17096 107 aaKnown RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 IFNAR1P17181 557 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 RPL9P32969 192 aaKnown RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 HOXD12P35452 270 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 CCNFP41002 786 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 ABCG1P45844 678 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 ALDH1A3P47895 512 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 AARSP49588 968 aaKnown RBP eCLIP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 SLURP1P55000 103 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 RACK1P63244 317 aaKnown RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 GFPT1Q06210 699 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 RAD51AP2Q09MP3 1159 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 PDGFRLQ15198 375 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 SPDYCQ5MJ68 293 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 ATF7IP2Q5U623 682 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 TXNDC8Q6A555 127 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 TTC30AQ86WT1 665 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 SLC41A1Q8IVJ1 513 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 ZBTB8OSQ8IWT0 167 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 MAB21L3Q8N8X9 362 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 LSM14AQ8ND56 463 aaKnown RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 STKLD1Q8NE28 680 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 APPL2Q8NEU8 664 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 OR10T2Q8NGX3 314 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 SLC6A18Q96N87 628 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 ADPGKQ9BRR6 497 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 C22orf23Q9BZE7 217 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 UPF2Q9HAU5 1272 aaKnown RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 NCOA5Q9HCD5 579 aaKnown RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 POLD4Q9HCU8 107 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 ZDHHC4Q9NPG8 344 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 TDP1Q9NUW8 608 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 WNT6Q9Y6F9 365 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 ZNF638Q14966 1978 aaKnown RBP7.16□□□□□ -1.26
SDCBP-210ENST00000522843 KNTC1P50748 2209 aa7.16□□□□□ -1.26
SDCBP-210ENST00000522843 COL5A1P20908 1838 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-210ENST00000522843 TSC2P49815 1807 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 TEX15Q9BXT5 2789 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 CITO14578 2027 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 MYO18AQ92614 2054 aaKnown RBP7.15□□□□□ -1.26
SDCBP-210ENST00000522843 FAM149AA5PLN7 773 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 PPEF2O14830 753 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 TLX3O43711 291 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-210ENST00000522843 TADA3O75528 432 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 REC8O95072 547 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 FGF19O95750 216 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 ATXN1LP0C7T5 689 aaKnown RBP7.15□□□□□ -1.26
SDCBP-210ENST00000522843 PRKCAP17252 672 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 CDC25CP30307 473 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 ATXN3P54252 364 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-210ENST00000522843 YWHAHQ04917 246 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-210ENST00000522843 SLC14A1Q13336 389 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 MTF1Q14872 753 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 ZNF77Q15935 545 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 EMC10Q5UCC4 262 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 Q6ZUG5 572 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 ALLCQ8N6M5 410 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 IL17RCQ8NAC3 791 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 CEP76Q8TAP6 659 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 OSCP1Q8WVF1 389 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 BRF1Q92994 677 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 SLC22A12Q96S37 553 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 C2orf40Q9H1Z8 148 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 LINC00597Q9H2U6 94 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 SLC38A7Q9NVC3 462 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 KCNJ14Q9UNX9 436 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 TNFSF13BQ9Y275 285 aa7.15□□□□□ -1.26
SDCBP-210ENST00000522843 GPR55Q9Y2T6 319 aaPredicted RBP7.15□□□□□ -1.26
SDCBP-210ENST00000522843 KNL1Q8NG31 2342 aa7.15□□□□□ -1.27
SDCBP-210ENST00000522843 OR6C75A6NL08 312 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SCAMP3O14828 347 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SIGLEC6O43699 453 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 MARCH6O60337 910 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CCNT1O60563 726 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 KLF8O95600 359 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ANK1P16157 1881 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ATP2B1P20020 1258 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 PROZP22891 400 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 AVPR1AP37288 418 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 EIF2S3P41091 472 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 NAMPTP43490 491 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SLC6A11P48066 632 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 GPR15P49685 360 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 GUCY2FP51841 1108 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ANAPC15P60006 121 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CCT2P78371 535 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ZXDBP98169 803 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 AMPD2Q01433 879 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 AKAP17AQ02040 695 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CFHR1Q03591 330 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ZNF33AQ06730 810 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SPAG1Q07617 926 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms