RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PCDHA4Q9UN74 947 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 TRAF6Q9Y4K3 522 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 LGALS16A8MUM7 142 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 FAM25AB3EWG3 89 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 FAM25CB3EWG5 89 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 FAM25GB3EWG6 89 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 KCNJ18B7U540 433 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 ARHGEF10O15013 1369 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 PTP4A3O75365 173 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 IDH1O75874 414 aaKnown RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 CALB1P05937 261 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 PRKAR1AP10644 381 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 PTX3P26022 381 aaPredicted RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 NOS3P29474 1203 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 KCNJ5P48544 419 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 CDK16Q00536 496 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 ZBTB16Q05516 673 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 CACNB2Q08289 660 aaPredicted RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 GALNT3Q14435 633 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 KCNJ12Q14500 433 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 SPARCL1Q14515 664 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 LRRC36Q1X8D7 754 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 MINDY4Q4G0A6 757 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 MEI1Q5TIA1 1274 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 PDPK2PQ6A1A2 396 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 CDC42BPGQ6DT37 1551 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 ZNF425Q6IV72 752 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 KYAT3Q6YP21 454 aaKnown RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 MACC1Q6ZN28 852 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 HAUS6Q7Z4H7 955 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 AMIGO2Q86SJ2 522 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 CAMK1DQ8IU85 385 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 TPH2Q8IWU9 490 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 C8orf58Q8NAV2 365 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 FIG4Q92562 907 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 PPP1R36Q96LQ0 422 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 C1orf50Q9BV19 199 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 TRIM62Q9BVG3 475 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 TMEM168Q9H0V1 697 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 SCUBE2Q9NQ36 999 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 ARL8BQ9NVJ2 186 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 NKIRAS1Q9NYS0 192 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 EBF1Q9UH73 591 aa8.5□□□□□ -1.05
HMGB4-204ENST00000522796 WBP11Q9Y2W2 641 aaKnown RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 CHTOPQ9Y3Y2 248 aaKnown RBP8.5□□□□□ -1.05
HMGB4-204ENST00000522796 ANKRD26Q9UPS8 1709 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 EDF1O60869 148 aaKnown RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SERPINI2O75830 405 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 TM7SF2O76062 418 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 CSF2RAP15509 400 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 GAP43P17677 238 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 ATF3P18847 181 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 GARSP41250 739 aaKnown RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 OR1G1P47890 313 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 GPX6P59796 221 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 EFHC1Q5JVL4 640 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 OGFRL1Q5TC84 451 aaPredicted RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 CACHD1Q5VU97 1274 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 MTDHQ86UE4 582 aaKnown RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 TMPRSS6Q8IU80 811 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 HERC6Q8IVU3 1022 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 RAB7BQ96AH8 199 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 FEM1CQ96JP0 617 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 GCNAQ96QF7 691 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SLC2A11Q9BYW1 496 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 FRMD8Q9BZ67 464 aaPredicted RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 TRIM45Q9H8W5 580 aaPredicted RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 KCNK9Q9NPC2 374 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 DTNAQ9Y4J8 743 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 AFG3L2Q9Y4W6 797 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 ZHX2Q9Y6X8 837 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 A0A1W2PQJ5 194 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 DBX1A6NMT0 343 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 C12orf71A8MTZ7 269 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 AKAP10O43572 662 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 MAN1A2O60476 641 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SNAP91O60641 907 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SOCS5O75159 536 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SLITRK5O94991 958 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SEMA3DO95025 777 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SNAPINO95295 136 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 GH1P01241 217 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 RPS17P08708 135 aaKnown RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 DNAJA1P31689 397 aaKnown RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 HNRNPH3P31942 346 aaKnown RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 FOXN2P32314 431 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 GP5P40197 560 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 CCR10P46092 362 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 AFF1P51825 1210 aaKnown RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 HIRAP54198 1017 aaPredicted RBP8.49□□□□□ -1.05
HMGB4-204ENST00000522796 ESRRGP62508 458 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 RNF4P78317 190 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 IL1RL1Q01638 556 aa8.49□□□□□ -1.05
HMGB4-204ENST00000522796 SSRP1Q08945 709 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms