RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DDX50Q9BQ39 737 aaKnown RBP21.48■■□□□ 1.03
SDCBP-209ENST00000522243 NUP62CLQ9H1M0 184 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 TMEM245Q9H330 911 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 POPDC2Q9HBU9 364 aa21.48■■□□□ 1.03
SDCBP-209ENST00000522243 PCDH15Q96QU1 1955 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 TYW5A2RUC4 315 aaKnown RBP21.47■■□□□ 1.03
SDCBP-209ENST00000522243 TRUB2O95900 331 aaKnown RBP21.47■■□□□ 1.03
SDCBP-209ENST00000522243 PRKCSHP14314 528 aaPredicted RBP21.47■■□□□ 1.03
SDCBP-209ENST00000522243 POLR2EP19388 210 aaKnown RBP21.47■■□□□ 1.03
SDCBP-209ENST00000522243 CAMK2GQ13555 558 aaPredicted RBP21.47■■□□□ 1.03
SDCBP-209ENST00000522243 FAM124AQ86V42 546 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 FAM114A1Q8IWE2 563 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 OR2I1PQ8NGU4 316 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 OR2T3Q8NH03 318 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 FOXJ1Q92949 421 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 CPXM1Q96SM3 734 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 IRX2Q9BZI1 471 aaPredicted RBP21.47■■□□□ 1.03
SDCBP-209ENST00000522243 CAPN10Q9HC96 672 aa21.47■■□□□ 1.03
SDCBP-209ENST00000522243 SYNJ2BP-COX16A0A087WUM0 186 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 MEI4A8MW99 385 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 GRAP2O75791 330 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 APOEP02649 317 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 ATP5BP06576 529 aaKnown RBP21.46■■□□□ 1.03
SDCBP-209ENST00000522243 DLDP09622 509 aaKnown RBP21.46■■□□□ 1.03
SDCBP-209ENST00000522243 PMLP29590 882 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 PTK2Q05397 1052 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 VWA3BQ502W6 1294 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 DCAF6Q58WW2 860 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 SYCP2LQ5T4T6 812 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 RAP1GAP2Q684P5 730 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 MMS22LQ6ZRQ5 1243 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 BEND5Q7L4P6 421 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 CHSY1Q86X52 802 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 LGI2Q8N0V4 545 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 DEFB106AQ8N104 65 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 C1orf131Q8NDD1 294 aaKnown RBP21.46■■□□□ 1.03
SDCBP-209ENST00000522243 DEFB124Q8NES8 71 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 FIBINQ8TAL6 211 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 PPP1R13BQ96KQ4 1090 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 LMLNQ96KR4 655 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 TRIM62Q9BVG3 475 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 NDST4Q9H3R1 872 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 MTG2Q9H4K7 406 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 PRSS16Q9NQE7 514 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 COX16Q9P0S2 106 aa21.46■■□□□ 1.03
SDCBP-209ENST00000522243 FOXN3O00409 490 aaPredicted RBP21.45■■□□□ 1.02
SDCBP-209ENST00000522243 OXTRP30559 389 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 CLCN1P35523 988 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 PLEKHG6Q3KR16 790 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 FSCBQ5H9T9 825 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 MIIPQ5JXC2 388 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 WDR45BQ5MNZ6 344 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 OR6B2Q6IFH4 312 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 SLC47A2Q86VL8 602 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 TUBGCP2Q9BSJ2 902 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 MIR1-1HGQ9H1L0 117 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 LHX5Q9H2C1 402 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 PLCB1Q9NQ66 1216 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 INTS6Q9UL03 887 aaKnown RBP21.45■■□□□ 1.02
SDCBP-209ENST00000522243 PCDHGC3Q9UN70 934 aa21.45■■□□□ 1.02
SDCBP-209ENST00000522243 PES1O00541 588 aaKnown RBP21.44■■□□□ 1.02
SDCBP-209ENST00000522243 ARHGAP33O14559 1287 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 IGLV3-25P01717 112 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 CSRP1P21291 193 aaKnown RBP21.44■■□□□ 1.02
SDCBP-209ENST00000522243 TACR2P21452 398 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 CSKP41240 450 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 ZNF252P-AS1Q0IIN9 211 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 KCNMA1Q12791 1236 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 CDH18Q13634 790 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 DCAF12L1Q5VU92 463 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 FAM183BPQ6ZVS7 135 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 RABEPKQ7Z6M1 372 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 CCDC117Q8IWD4 279 aaPredicted RBP21.44■■□□□ 1.02
SDCBP-209ENST00000522243 MINDY1Q8N5J2 469 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 ZNF557Q8N988 423 aaPredicted RBP21.44■■□□□ 1.02
SDCBP-209ENST00000522243 NUP58Q9BVL2 599 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 FAM204AQ9H8W3 233 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 SAMSN1Q9NSI8 373 aaKnown RBP21.44■■□□□ 1.02
SDCBP-209ENST00000522243 DACH1Q9UI36 760 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 ANGPTL2Q9UKU9 493 aa21.44■■□□□ 1.02
SDCBP-209ENST00000522243 ASCC3Q8N3C0 2202 aaKnown RBP21.44■■□□□ 1.02
SDCBP-209ENST00000522243 FAM170AA1A519 330 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 H0Y626 953 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 LUC7L3O95232 432 aaKnown RBP21.43■■□□□ 1.02
SDCBP-209ENST00000522243 IGLV3-19P01714 112 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 ERBB2P04626 1255 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 CEACAM1P13688 526 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 GNSP15586 552 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 ERCC5P28715 1186 aaPredicted RBP21.43■■□□□ 1.02
SDCBP-209ENST00000522243 KRT9P35527 623 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 NUMBP49757 651 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 RPS14P62263 151 aaKnown RBP21.43■■□□□ 1.02
SDCBP-209ENST00000522243 CDK17Q00537 523 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 DPY19L2P1Q6NXN4 242 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 HDDC3Q8N4P3 179 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 ZCCHC9Q8N567 271 aaKnown RBP21.43■■□□□ 1.02
SDCBP-209ENST00000522243 ATP6V0D2Q8N8Y2 350 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 CADM4Q8NFZ8 388 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 MYO19Q96H55 970 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 BTN2A3PQ96KV6 586 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms