RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TEX35Q5T0J7 233 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ACBD5Q5T8D3 534 aaPredicted RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 NADSYN1Q6IA69 706 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 NPNTQ6UXI9 565 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 PLD5Q8N7P1 536 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 TTC13Q8NBP0 860 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ADAMTS19Q8TE59 1207 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 AZIN2Q96A70 460 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 TBC1D31Q96DN5 1066 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ZSWIM3Q96MP5 696 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 DCLK3Q9C098 648 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 HOMER3Q9NSC5 361 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ETNK2Q9NVF9 386 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 CLEC1BQ9P126 229 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 CFAP97Q9P2B7 532 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 CDH22Q9UJ99 828 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 LSM7Q9UK45 103 aaKnown RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 AGO1Q9UL18 857 aaKnown RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ATG2AQ2TAZ0 1938 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 EFCAB8A8MWE9 144 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 APOC4-APOC2K7ER74 178 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 SCAMP3O14828 347 aaKnown RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 PHF2O75151 1096 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 APOC2P02655 101 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 POU3F3P20264 500 aaPredicted RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 TACR2P21452 398 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 HTR7P34969 479 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 MANEALQ5VSG8 457 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 MMGT1Q8N4V1 131 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 P3H4Q92791 437 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 GAS2L1Q99501 681 aaPredicted RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 PRMT1Q99873 361 aaKnown RBP22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 PRDM16Q9HAZ2 1276 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ZMYM5Q9UJ78 669 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 ARHGAP26Q9UNA1 814 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 SH3BP1Q9Y3L3 701 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 MFHAS1Q9Y4C4 1052 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 HEY1Q9Y5J3 304 aa22.06■■□□□ 1.12
R3HCC1-208ENST00000522012 LEFTY2O00292 366 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 PECAM1P16284 738 aaPredicted RBP22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 TGM2P21980 687 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 OTUD4Q01804 1114 aaKnown RBP22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 CCNG2Q16589 344 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 CYP1B1Q16678 543 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 NCBP2-AS2Q69YL0 99 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 FBXL22Q6P050 247 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 LGI2Q8N0V4 545 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 ACTL9Q8TC94 416 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 SH3RF2Q8TEC5 729 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 ADAM7Q9H2U9 754 aa22.05■■□□□ 1.12
R3HCC1-208ENST00000522012 F5H5T6 163 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 DCLK1O15075 740 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 CHRNA3P32297 505 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 DLX2Q07687 328 aaPredicted RBP22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 CES5AQ6NT32 575 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 RFWD3Q6PCD5 774 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 TMCO3Q6UWJ1 677 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 DDX42Q86XP3 938 aaKnown RBP eCLIP22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 ZNF683Q8IZ20 524 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 USP13Q92995 863 aaPredicted RBP22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 RPRD1AQ96P16 312 aaPredicted RBP22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 DDX50Q9BQ39 737 aaKnown RBP22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 LRRC19Q9H756 370 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 CATSPERBQ9H7T0 1116 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 TDP1Q9NUW8 608 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 MPP6Q9NZW5 540 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 CCL26Q9Y258 94 aa22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 V9GYY5 206 aaPredicted RBP22.04■■□□□ 1.12
R3HCC1-208ENST00000522012 FGF10O15520 208 aaPredicted RBP22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 GREM1O60565 184 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 TBX10O75333 385 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 SLC6A4P31645 630 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 COILP38432 576 aaPredicted RBP22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 MRPS25P82663 173 aaKnown RBP22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 GBE1Q04446 702 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 CTC1Q2NKJ3 1217 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 FAM133BQ5BKY9 247 aaKnown RBP22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 ATAT1Q5SQI0 421 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 ARTNQ5T4W7 220 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 ADGRF1Q5T601 910 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 C12orf50Q8NA57 414 aaPredicted RBP22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 MYRIPQ8NFW9 859 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 UBXN4Q92575 508 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 IGSF8Q969P0 613 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 ZYG11BQ9C0D3 744 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 NEU3Q9UQ49 428 aa22.03■■□□□ 1.12
R3HCC1-208ENST00000522012 TRDMT1O14717 391 aaKnown RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 LIASO43766 372 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 MAP3K6O95382 1288 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 LATS1O95835 1130 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 HOXC13P31276 330 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 KCNJ1P48048 391 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 EIF3EP60228 445 aaKnown RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 TUBB4BP68371 445 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 TTC27Q6P3X3 843 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 CCDC137Q6PK04 289 aaKnown RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 POTEHQ6S545 545 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 Q6ZNB5 142 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 HTR3DQ70Z44 454 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms