RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SLC12A6Q9UHW9 1150 aa18.53■□□□□ 0.56
TRAPPC9-211ENST00000521700 PCDHGA5Q9Y5G8 931 aa18.53■□□□□ 0.56
TRAPPC9-211ENST00000521700 CEP250Q9BV73 2442 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 ZBTB24O43167 697 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 SLC2A3P11169 496 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 TACR2P21452 398 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 MATKP42679 507 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 RNASE9P60153 205 aaKnown RBP18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 NOMO3P69849 1222 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 CDR2Q01850 454 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 E2F5Q15329 346 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 RSPO4Q2I0M5 234 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 FUT11Q495W5 492 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 C2CD6Q53TS8 623 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 PLA2G2CQ5R387 149 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 NAA35Q5VZE5 725 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 MBLAC2Q68D91 279 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 MFN1Q8IWA4 741 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 LGI2Q8N0V4 545 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 AHI1Q8N157 1196 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 CYB5D2Q8WUJ1 264 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 RNF34Q969K3 372 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 SPACA7Q96KW9 195 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 MRGPRX1Q96LB2 322 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 PRMT1Q99873 361 aaKnown RBP18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 FUCA2Q9BTY2 467 aa18.52■□□□□ 0.56
TRAPPC9-211ENST00000521700 PLXND1Q9Y4D7 1925 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 BCLAF3A2AJT9 711 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 TYW5A2RUC4 315 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 SMTNL1A8MU46 457 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 PRR5-ARHGAP8B1AHC4 643 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 M0QYT0 321 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 MAP3K13O43283 966 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 CYP1A1P04798 512 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 ZNF806P0C7X5 589 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 ABCB4P21439 1286 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 PRKCHP24723 683 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 CCR1P32246 355 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 SCNN1AP37088 669 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 MPLP40238 635 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 ARHGAP8P85298 464 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 FMO1Q01740 532 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 CREB5Q02930 508 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 ARID5AQ03989 594 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 LMAN2Q12907 356 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 NME3Q13232 169 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 STARD3Q14849 445 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 SF3A2Q15428 464 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 OTUD1Q5VV17 481 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 CHSY1Q86X52 802 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 CARNMT1Q8N4J0 409 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 ZNF557Q8N988 423 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 NPY6RQ99463 290 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 ADAM33Q9BZ11 813 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 SMOC1Q9H4F8 434 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 DLL3Q9NYJ7 618 aa18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAPPC9-211ENST00000521700 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 TEX33O43247 280 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 TFE3P19532 575 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 ZNF165P49910 485 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 PTPRNQ16849 979 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 FSCBQ5H9T9 825 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 FAM102AQ5T9C2 384 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 SERPINA13PQ6UXR4 307 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 LPCAT2Q7L5N7 544 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 TMEFF1Q8IYR6 380 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 NT5C3BQ969T7 300 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 MKRN2Q9H000 416 aaKnown RBP18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 TMEM245Q9H330 911 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 CD93Q9NPY3 652 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 RRN3Q9NYV6 651 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 INTS6Q9UL03 887 aaKnown RBP18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 PLA2G4CQ9UP65 541 aa18.5■□□□□ 0.55
TRAPPC9-211ENST00000521700 NUP205Q92621 2012 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 IGHV1OR15-9A0A0B4J2B8 117 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 F5H5T6 163 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 GOLGA8SH3BPF8 625 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 GDF9O60383 454 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 SYNCRIPO60506 623 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 ZNF217O75362 1048 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 LUC7L3O95232 432 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 CAVIN2O95810 425 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 EPHX1P07099 455 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 DLDP09622 509 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 HLA-EP13747 358 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 POLR2EP19388 210 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 DHPSP49366 369 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 IQCB1Q15051 598 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 FNDC3BQ53EP0 1204 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 KIAA1324Q6UXG2 1013 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 MMS22LQ6ZRQ5 1243 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 MSANTD4Q8NCY6 345 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 TTC17Q96AE7 1141 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 PCDHB18PQ96TA0 734 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 PRDM16Q9HAZ2 1276 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 RTN4Q9NQC3 1192 aaKnown RBP18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 VPS45Q9NRW7 570 aa18.49■□□□□ 0.55
TRAPPC9-211ENST00000521700 PIGVQ9NUD9 493 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms