RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 HOXD10P28358 340 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 GARSP41250 739 aaKnown RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 TUSC3Q13454 348 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 KCNJ11Q14654 390 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 HSP90AA5PQ58FG0 334 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 C4orf50Q6ZRC1 276 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 PIGWQ7Z7B1 504 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 MTDHQ86UE4 582 aaKnown RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 GBP7Q8N8V2 638 aaPredicted RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CCT6BQ92526 530 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 FRMD8Q9BZ67 464 aaPredicted RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 PRM3Q9NNZ6 103 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 MPP6Q9NZW5 540 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 C2orf71A6NGG8 1288 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 MGEA5O60502 916 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 SOAT2O75908 522 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 ASMTLO95671 621 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 VAV1P15498 845 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CTGFP29279 349 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 ETFBP38117 255 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 SERPINB4P48594 390 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CCDC6Q16204 474 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CTXN3Q4LDR2 81 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CYB5D1Q6P9G0 228 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 NLRP9Q7RTR0 991 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CAND1Q86VP6 1230 aaKnown RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 ZNF567Q8N184 647 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 FITM2Q8N6M3 262 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 ATAD1Q8NBU5 361 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 NSMCE1Q8WV22 266 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 PPP1R36Q96LQ0 422 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CD248Q9HCU0 757 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CHST12Q9NRB3 414 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 RNF186Q9NXI6 227 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 OPHN1O60890 802 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 DCTN3O75935 186 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 LRIG2O94898 1065 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 NFKB1P19838 968 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 GRK4P32298 578 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 RPL9P32969 192 aaKnown RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 CPA2P48052 419 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 GJA9P57773 515 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 ITPRIPL1Q6GPH6 555 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 PAQR9Q6ZVX9 377 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 CYP4V2Q6ZWL3 525 aaPredicted RBP11.67□□□□□ -0.54
CLK4-206ENST00000520878 OTOAQ7RTW8 1153 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 PARP9Q8IXQ6 854 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 SLC44A1Q8WWI5 657 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 SYBUQ9NX95 663 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 HEY2Q9UBP5 337 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 VANGL2Q9ULK5 521 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 Q9Y3F1 56 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 TEX264Q9Y6I9 313 aa11.67□□□□□ -0.54
CLK4-206ENST00000520878 PRRC2BQ5JSZ5 2229 aaKnown RBP11.66□□□□□ -0.54
CLK4-206ENST00000520878 TRIP12Q14669 1992 aaPredicted RBP11.66□□□□□ -0.54
CLK4-206ENST00000520878 C5orf60A6NFR6 353 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 H0Y3Z8 333 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 ZBTB24O43167 697 aaPredicted RBP11.66□□□□□ -0.54
CLK4-206ENST00000520878 CSH1P0DML2 217 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 CSH2P0DML3 217 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 GCAP28676 217 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 TUBP50607 506 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 GTF2A1P52655 376 aaPredicted RBP11.66□□□□□ -0.54
CLK4-206ENST00000520878 RPL10AP62906 217 aaKnown RBP11.66□□□□□ -0.54
CLK4-206ENST00000520878 KCNJ2P63252 427 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 POU6F1Q14863 301 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 PDK4Q16654 411 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 TAC4Q86UU9 113 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 CRLF3Q8IUI8 442 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 QKIQ96PU8 341 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLK4-206ENST00000520878 NPY6RQ99463 290 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 CPSF2Q9P2I0 782 aaKnown RBP11.66□□□□□ -0.54
CLK4-206ENST00000520878 CBX6O95503 412 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 KCNA4P22459 653 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 LRPAP1P30533 357 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 RAB27AP51159 221 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 SLC12A2P55011 1212 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 C10orf120Q5SQS8 335 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 ATG16L1Q676U5 607 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 C6orf89Q6UWU4 347 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 SERINC5Q86VE9 423 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 ZNF280BQ86YH2 543 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 DQX1Q8TE96 717 aaKnown RBP11.66□□□□□ -0.54
CLK4-206ENST00000520878 DCAKDQ8WVC6 231 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 APOPT1Q96IL0 206 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 SPON2Q9BUD6 331 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 TXLNGQ9NUQ3 528 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 TLK1Q9UKI8 766 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 FIS1Q9Y3D6 152 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 ARID2Q68CP9 1835 aa11.66□□□□□ -0.54
CLK4-206ENST00000520878 SCAMP3O14828 347 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 FSBPO95073 299 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 SLC10A3P09131 477 aa11.65□□□□□ -0.54
CLK4-206ENST00000520878 EZRP15311 586 aaKnown RBP11.65□□□□□ -0.54
CLK4-206ENST00000520878 SESN3P58005 492 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms