RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 MAGEB2O15479 319 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 RARGP13631 454 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PRELPP51888 382 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 FUT11Q495W5 492 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 RBM43Q6ZSC3 357 aaKnown RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 SIPA1Q96FS4 1042 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 FAM49BQ9NUQ9 324 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 ERBB4Q15303 1308 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PDXKO00764 312 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 NCK2O43639 380 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 IL18RAPO95256 599 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PSMG1O95456 288 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PITPNAQ00169 270 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 PSMA1P25786 263 aaKnown RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 ZNF790Q6PG37 636 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 HIPK1Q86Z02 1210 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 TCEAL7Q9BRU2 100 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 UBA1P22314 1058 aaKnown RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 GCLMP48507 274 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 RGS6P49758 472 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 CATSPER4Q7RTX7 472 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 MCCC1Q96RQ3 725 aaPredicted RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 MTG1Q9BT17 334 aaPredicted RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 RETREG1Q9H6L5 497 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 SPAG4Q9NPE6 437 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 SAE1Q9UBE0 346 aaPredicted RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 CRLS1Q9UJA2 301 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 ZNF180Q9UJW8 692 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 ARID1AO14497 2285 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 FAM189A2Q15884 450 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 OTUD3Q5T2D3 398 aaPredicted RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 CCDC28AQ8IWP9 274 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PCDH19Q8TAB3 1148 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 SSH3Q8TE77 659 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 GPR63Q9BZJ6 419 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 TRPV5Q9NQA5 729 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 MROH7-TTC4A0A0A0MT08 1334 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 WDR59Q6PJI9 974 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 TRIM48Q8IWZ4 208 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 EZH1Q92800 747 aaPredicted RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 NOL11Q9H8H0 719 aaKnown RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 NECTIN3Q9NQS3 549 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PLIN3O60664 434 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 MED24O75448 989 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 CLUP10909 449 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PDK3Q15120 406 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 SLC45A4Q5BKX6 768 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 PAPD7Q5XG87 772 aaKnown RBP15.8■□□□□ 0.12
UBR5-207ENST00000520539 HMBOX1Q6NT76 420 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 FRMD7Q6ZUT3 714 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 ZNF398Q8TD17 642 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 M0R036 132 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 SLC27A3Q5K4L6 730 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 SYDE2Q5VT97 1194 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 CROTQ9UKG9 612 aa15.8■□□□□ 0.12
UBR5-207ENST00000520539 ERVK-10P10266 1014 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 YIPF2Q9BWQ6 316 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 GPR108Q9NPR9 543 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 DYRK1BQ9Y463 629 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 TPRP12270 2363 aaKnown RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 TRIM3O75382 744 aaPredicted RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 UBOX5O94941 541 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 FDPSP14324 419 aaKnown RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 SULT1E1P49888 294 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 NEK3P51956 506 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 TMBIM6P55061 237 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 IL18Q14116 193 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 ZMYM1Q5SVZ6 1142 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.79■□□□□ 0.12
UBR5-207ENST00000520539 CDH19Q9H159 772 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 FARSAQ9Y285 508 aaKnown RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 FOXN3O00409 490 aaPredicted RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 RPL22P35268 128 aaKnown RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 PLD1Q13393 1074 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 BMT2Q1RMZ1 405 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 SULT1C3Q6IMI6 304 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 MCFD2Q8NI22 146 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 KANTRA0A1W2PQU2 76 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 DDX17Q92841 729 aaKnown RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 MKL1Q969V6 931 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 CDK5RAP1Q96SZ6 601 aaKnown RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 CLPBQ9H078 707 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 ATP7BP35670 1465 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 BIKQ13323 160 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 TMPRSS11AQ6ZMR5 421 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 HPS6Q86YV9 775 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 FAM126BQ8IXS8 530 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 GRAMD1CQ8IYS0 662 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 OR5J2Q8NH18 312 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 C14orf93Q9H972 538 aaKnown RBP15.79■□□□□ 0.12
UBR5-207ENST00000520539 SLC38A7Q9NVC3 462 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 IKZF3Q9UKT9 509 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 RPS6KL1Q9Y6S9 549 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 FAM228BP0C875 321 aa15.79■□□□□ 0.12
UBR5-207ENST00000520539 NFKB1P19838 968 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms