RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 KIF28PB7ZC32 967 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3LB9A6J9 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 SGPL1O95470 568 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3HP0C7X1 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 DHRS4L1P0CG22 281 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 GYS1P13807 737 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 VEGFAP15692 232 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 SFPQP23246 707 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 NDUFS1P28331 727 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TACR3P29371 465 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 GRK5P34947 590 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 MCM2P49736 904 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 AGTR2P50052 363 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZNF84P51523 738 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ARL4CP56559 192 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 RPL15P61313 204 aaKnown RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 SLC14A1Q13336 389 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 DHX8Q14562 1220 aaKnown RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 BTBD16Q32M84 506 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 INO80DQ53TQ3 878 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ANKRD40Q6AI12 368 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3GQ6DHY5 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3CQ6IPX1 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ANO7Q6IWH7 933 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 JMJD6Q6NYC1 403 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZNF782Q6ZMW2 699 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3Q8IZP1 549 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ANKRD42Q8N9B4 389 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 OR6Y1Q8NGX8 325 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 RUBCNQ92622 972 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 DPF1Q92782 380 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TRAPPC9Q96Q05 1148 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ELOVL1Q9BW60 279 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TRIM2Q9C040 744 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 MYH16Q9H6N6 1097 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ELAC1Q9H777 363 aaKnown RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 MLXIPQ9HAP2 919 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ERVK-5Q9HDB9 667 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ARL8BQ9NVJ2 186 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ASNSD1Q9NWL6 643 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 HEMK1Q9Y5R4 338 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 ARAP1Q96P48 1450 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 CYP3A7-CYP3A51PA0A087WV96 503 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 HMX3A6NHT5 357 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC38A8A6NNN8 435 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 IPO5O00410 1097 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 PPP6CO00743 305 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 PRYO14603 147 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 DSCR3O14972 297 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 IRAK2O43187 625 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 FAM155BO75949 473 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 ALDOAP04075 364 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 ENO1P06733 434 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 CYP2D6P10635 497 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 IGFBP2P18065 325 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 CYP3A7P24462 503 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 VPS41P49754 854 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 TAS2R50P59544 299 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 HSF1Q00613 529 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 KPNB1Q14974 876 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 POSTNQ15063 836 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 RPS6KA2Q15349 733 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 ADCK5Q3MIX3 580 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 MEX3CQ5U5Q3 659 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 DGAT2L7PQ6IED9 249 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC39A5Q6ZMH5 540 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 UBE2Q1Q7Z7E8 422 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 UEVLDQ8IX04 471 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 GALNT16Q8N428 558 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 OSR1Q8TAX0 266 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 SPPL3Q8TCT6 385 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 BCAS4Q8TDM0 211 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 THAP4Q8WY91 577 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 C3orf49Q96BT1 292 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 TBC1D20Q96BZ9 403 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 MCRS1Q96EZ8 462 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 TRMT61AQ96FX7 289 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 C5orf34Q96MH7 638 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 NPAS1Q99742 590 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 FAM118BQ9BPY3 351 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 FAM167BQ9BTA0 163 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 EFHD1Q9BUP0 239 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 TAF1DQ9H5J8 278 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 SEPSECSQ9HD40 501 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 KIF17Q9P2E2 1029 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 SRP68Q9UHB9 627 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 BAG5Q9UL15 447 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 SLC12A4Q9UP95 1085 aa3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 DHX57Q6P158 1386 aaKnown RBP3.71□□□□□ -1.82
HMGB1P41-201ENST00000520234 WDR17Q8IZU2 1322 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 H0Y3Z8 333 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 M0QYT0 321 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 HNRNPRO43390 633 aaKnown RBP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 PIP5K1CO60331 668 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 TFRCP02786 760 aaKnown RBP3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 CD63P08962 238 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 HSD3B1P14060 373 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 SERPINA4P29622 427 aa3.7□□□□□ -1.82
HMGB1P41-201ENST00000520234 ADD2P35612 726 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms