RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 UXTQ9UBK9 157 aaPredicted RBP12.78□□□□□ -0.36
SPIDR-209ENST00000519141 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 ANAPC5Q9UJX4 755 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
SPIDR-209ENST00000519141 IRAK3Q9Y616 596 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 REV3LO60673 3130 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 ANAPC1Q9H1A4 1944 aa12.78□□□□□ -0.36
SPIDR-209ENST00000519141 OBSL1O75147 1896 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.36
SPIDR-209ENST00000519141 ZNF840PA6NDX5 716 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 HACD1B0YJ81 288 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 DNALI1O14645 258 aaPredicted RBP12.77□□□□□ -0.36
SPIDR-209ENST00000519141 KCNN4O15554 427 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 LPXNO60711 386 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 SPATA31D3P0C874 917 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 SERPINB6P35237 376 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 ACTN2P35609 894 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 ATP5C1P36542 298 aaKnown RBP12.77□□□□□ -0.36
SPIDR-209ENST00000519141 HSPA9P38646 679 aaKnown RBP12.77□□□□□ -0.36
SPIDR-209ENST00000519141 PPP3CCP48454 512 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 ITGA8P53708 1063 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 ERVFC1P60507 584 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 RING1Q06587 406 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 SLC10A2Q12908 348 aaPredicted RBP12.77□□□□□ -0.36
SPIDR-209ENST00000519141 PDK1Q15118 436 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 HECTD3Q5T447 861 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 PLPP4Q5VZY2 271 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 RWDD4Q6NW29 188 aaKnown RBP12.77□□□□□ -0.36
SPIDR-209ENST00000519141 SPATA31D4Q6ZUB0 917 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 CCDC149Q6ZUS6 474 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 SPPL3Q8TCT6 385 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 POF1BQ8WVV4 589 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 TBC1D31Q96DN5 1066 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 VIPAS39Q9H9C1 493 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 DNMT3LQ9UJW3 386 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 ASB3Q9Y575 518 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 RAD54BQ9Y620 910 aa12.77□□□□□ -0.36
SPIDR-209ENST00000519141 MUC3AQ02505 3323 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 MTCL1Q9Y4B5 1905 aaKnown RBP12.77□□□□□ -0.37
SPIDR-209ENST00000519141 GRXCR1A8MXD5 290 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 C5orf67F2Z3F1 127 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 PPP1R12AO14974 1030 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-209ENST00000519141 FGF10O15520 208 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-209ENST00000519141 CSPG5O95196 566 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 GLUD1P00367 558 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 IGLV3-27P01718 113 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 LRG1P02750 347 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 RB1P06400 928 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 RBL1P28749 1068 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 TUBP50607 506 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-209ENST00000519141 MTA1Q13330 715 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 MANEALQ5VSG8 457 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 NUGGCQ68CJ6 796 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 KLHDC10Q6PID8 442 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 B4GALNT4Q76KP1 1039 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 TMC3Q7Z5M5 1100 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 DNAJB7Q7Z6W7 309 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-209ENST00000519141 TFB1MQ8WVM0 346 aaKnown RBP12.77□□□□□ -0.37
SPIDR-209ENST00000519141 RTP4Q96DX8 246 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 BTN2A3PQ96KV6 586 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 CATSPERBQ9H7T0 1116 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 XPO7Q9UIA9 1087 aaKnown RBP12.77□□□□□ -0.37
SPIDR-209ENST00000519141 HPCAL4Q9UM19 191 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 HS3ST4Q9Y661 456 aa12.77□□□□□ -0.37
SPIDR-209ENST00000519141 C2orf71A6NGG8 1288 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 NCAM2O15394 837 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 ZNF189O75820 626 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 C8AP07357 584 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 HMBSP08397 361 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 MYOGP15173 224 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 HOXC13P31276 330 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 RPL22P35268 128 aaKnown RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 DHX9Q08211 1270 aaKnown RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 ACBD5Q5T8D3 534 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 PIK3R6Q5UE93 754 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 HEATR6Q6AI08 1181 aaKnown RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 LILRA6Q6PI73 481 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 RHBDF2Q6PJF5 856 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 CCDC33Q8N5R6 958 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 MRPL43Q8N983 215 aaKnown RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 TSEN2Q8NCE0 465 aaKnown RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 KREMEN2Q8NCW0 462 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 C1orf74Q96LT6 269 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 SAMD11Q96NU1 681 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 PBX4Q9BYU1 374 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 TSPYL1Q9H0U9 437 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 USP29Q9HBJ7 922 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 PAK5Q9P286 719 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 TPX2Q9ULW0 747 aaKnown RBP12.76□□□□□ -0.37
SPIDR-209ENST00000519141 NEU3Q9UQ49 428 aa12.76□□□□□ -0.37
SPIDR-209ENST00000519141 DOCK4Q8N1I0 1966 aa12.75□□□□□ -0.37
SPIDR-209ENST00000519141 TMEM265A0A087WTH1 108 aa12.75□□□□□ -0.37
SPIDR-209ENST00000519141 HIDE1A8MVS5 230 aa12.75□□□□□ -0.37
SPIDR-209ENST00000519141 E9PAM4 449 aa12.75□□□□□ -0.37
SPIDR-209ENST00000519141 TP73O15350 636 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms