RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SLC43A3Q8NBI5 491 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 PDPRQ8NCN5 879 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 LSM14AQ8ND56 463 aaKnown RBP13.9□□□□□ -0.18
PABPC1-208ENST00000519004 TNIP2Q8NFZ5 429 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 SPATA17Q96L03 361 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 MARCH7Q9H992 704 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 CRNNQ9UBG3 495 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-208ENST00000519004 NXF1Q9UBU9 619 aaKnown RBP13.9□□□□□ -0.18
PABPC1-208ENST00000519004 KLQ9UEF7 1012 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 PNMA6FA0A0J9YX94 578 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-208ENST00000519004 CENPBD1B2RD01 187 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 TISP43B9A030 160 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 GPR25O00155 361 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 TEX28O15482 410 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 ABCB1P08183 1280 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-208ENST00000519004 KCNA2P16389 499 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 AP3M2P53677 418 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 CCDC58Q4VC31 144 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 SLC9A4Q6AI14 798 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 RNF19BQ6ZMZ0 732 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 HEATR4Q86WZ0 1026 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 SNX32Q86XE0 403 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 ZSWIM2Q8NEG5 633 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 SUN5Q8TC36 379 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 HCAR2Q8TDS4 363 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 CIB1Q99828 191 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 VRTNQ9H8Y1 702 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 JMJD4Q9H9V9 463 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 PCDH12Q9NPG4 1184 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 AGO2Q9UKV8 859 aaKnown RBP13.9□□□□□ -0.18
PABPC1-208ENST00000519004 PLIN4Q96Q06 1357 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 HMX2A2RU54 273 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 STX16-NPEPL1H3BU86 382 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 AKR1B1P15121 316 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 MATN1P21941 496 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 PIK3R1P27986 724 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 ZNF846Q147U1 533 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 LDLRAP1Q5SW96 308 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 ZFYVE27Q5T4F4 411 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 C4orf22Q6V702 233 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 ZSCAN18Q8TBC5 510 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 TRIB2Q92519 343 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 APBB2Q92870 758 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 SH3YL1Q96HL8 342 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 MOV10Q9HCE1 1003 aaKnown RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 SMYD2Q9NRG4 433 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 TBC1D14Q9P2M4 693 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 ILVBLA1L0T0 632 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L15C9J2P7 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 CLDN25C9JDP6 229 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L13C9JLJ4 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L11C9JVI0 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L18D6R9N7 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L22D6RA61 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L17D6RBQ6 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L19D6RCP7 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L20D6RJB6 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 CFLARO15519 480 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 NOL3O60936 208 aaKnown RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 STARD3NLO95772 234 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 MYF6P23409 242 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 SERPINB5P36952 375 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 ECE1P42892 770 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 NUMBP49757 651 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 PSMC5P62195 406 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L24Q0WX57 530 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 TRPC3Q13507 836 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 DNASE1L3Q13609 305 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 ATAD3BQ5T9A4 648 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 HMBOX1Q6NT76 420 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 USP17L6PQ6QN14 398 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 PTAR1Q7Z6K3 402 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 SNX29P2Q8IUI4 249 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 PGAM4Q8N0Y7 254 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 GOLM1Q8NBJ4 401 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 CFAP36Q96G28 342 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 CNDP2Q96KP4 475 aaKnown RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 RMND5AQ9H871 391 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 CNGB3Q9NQW8 809 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 THG1LQ9NWX6 298 aaKnown RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 SAE1Q9UBE0 346 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-208ENST00000519004 SERPINB13Q9UIV8 391 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 EMCNQ9ULC0 261 aa13.89□□□□□ -0.19
PABPC1-208ENST00000519004 RBBP6Q7Z6E9 1792 aaKnown RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 ZNF839A8K0R7 811 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 PMM2O15305 246 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 PTPN7P35236 360 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 RFC1P35251 1148 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 GABRB2P47870 512 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 QARSP47897 775 aaKnown RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 NOVP48745 357 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 TNK2Q07912 1038 aa13.88□□□□□ -0.19
PABPC1-208ENST00000519004 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
PABPC1-208ENST00000519004 CEP55Q53EZ4 464 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms