RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 ANKRD20A1Q5TYW2 823 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 ANKRD20A3Q5VUR7 823 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 FYB2Q5VWT5 728 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 SYPL2Q5VXT5 272 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 BSPRYQ5W0U4 402 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 NUGGCQ68CJ6 796 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 VSTM1Q6UX27 236 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 HFE2Q6ZVN8 426 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 GPRIN1Q7Z2K8 1008 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 LRRC34Q8IZ02 419 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 C4orf33Q8N1A6 199 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 SCML4Q8N228 414 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 PPM1NQ8N819 430 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 COLGALT1Q8NBJ5 622 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 GSDMBQ8TAX9 411 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 CKAP2Q8WWK9 683 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 SEPT8Q92599 483 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 APBB2Q92870 758 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 GRAMD1AQ96CP6 724 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 STAMBPL1Q96FJ0 436 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 OLFM3Q96PB7 478 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 KCNK16Q96T55 309 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 PAAF1Q9BRP4 392 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 RHOBTB2Q9BYZ6 727 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
SPIDR-204ENST00000517824 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 SSU72Q9NP77 194 aaKnown RBP11.09□□□□□ -0.63
SPIDR-204ENST00000517824 ABCC13Q9NSE7 274 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 TXNDC16Q9P2K2 825 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 FBXW11Q9UKB1 542 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 PRG3Q9Y2Y8 225 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-204ENST00000517824 PCDHB7Q9Y5E2 793 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 MYLKQ15746 1914 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 MUC3AQ02505 3323 aa11.09□□□□□ -0.63
SPIDR-204ENST00000517824 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 TRDMT1O14717 391 aaKnown RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 INPPL1O15357 1258 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 FGF10O15520 208 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 DGKIO75912 1065 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 KRT38O76015 456 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 EPHB2P29323 1055 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 HTR7P34969 479 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 HCAR3P49019 387 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 GLUD2P49448 558 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 SERPINB9P50453 376 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 AFF1P51825 1210 aaKnown RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 GPX6P59796 221 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 DPYSQ14117 519 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 PRKD1Q15139 912 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 BRMS1LQ5PSV4 323 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 TTC39BQ5VTQ0 682 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 OTUD1Q5VV17 481 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 RWDD4Q6NW29 188 aaKnown RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 FAM171BQ6P995 826 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 CCDC91Q7Z6B0 441 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 YTHDF3Q7Z739 585 aaKnown RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 TAC4Q86UU9 113 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 CCNJLQ8IV13 435 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 C10orf67Q8IYJ2 551 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 CYP4X1Q8N118 509 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 NT5C3BQ969T7 300 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 PGAP3Q96FM1 320 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 PPP1R2P1Q96PQ5 205 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 ELAC2Q9BQ52 826 aaKnown RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 NAT9Q9BTE0 207 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 COLEC11Q9BWP8 271 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 MRPL9Q9BYD2 267 aaKnown RBP11.08□□□□□ -0.64
SPIDR-204ENST00000517824 TKTL2Q9H0I9 626 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 RASSF4Q9H2L5 321 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 FBXO44Q9H4M3 255 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 CATSPERBQ9H7T0 1116 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 TMEM161AQ9NX61 479 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 MTMR10Q9NXD2 777 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 PCDHB5Q9Y5E4 795 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 USP3Q9Y6I4 520 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 TEX264Q9Y6I9 313 aa11.08□□□□□ -0.64
SPIDR-204ENST00000517824 TCRBV9S1A1TA0A576 114 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 F5H423 210 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-204ENST00000517824 TMEM189-UBE2V1I3L0A0 370 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 ARVCFO00192 962 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 AP3B1O00203 1094 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 SYN3O14994 580 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 TM9SF1O15321 606 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 PSMD3O43242 534 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 LPXNO60711 386 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 APOEP02649 317 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 SLC2A3P11169 496 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 MLNP12872 115 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 ALADP13716 330 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 CPB1P15086 417 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 VAV1P15498 845 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 ERCC2P18074 760 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 KRT4P19013 534 aa11.07□□□□□ -0.64
SPIDR-204ENST00000517824 GARSP41250 739 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms