RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 SUN2Q9UH99 717 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PCDHB4Q9Y5E5 795 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ANKRD11Q6UB99 2663 aaPredicted RBP15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CABIN1Q9Y6J0 2220 aa15.19■□□□□ 0.02
SCARNA20.5-201ENST00000516991 KNL1Q8NG31 2342 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ACSL4O60488 711 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TBL1XO60907 577 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ASLP04424 464 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 GRIA4P48058 902 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 RGS7P49802 495 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TBX4P57082 545 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SFSWAPQ12872 951 aaKnown RBP15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PTPRNQ16849 979 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 HLA-BQ31612 363 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CCDC40Q4G0X9 1142 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SETD7Q8WTS6 366 aaKnown RBP15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TFAP2BQ92481 460 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SERPINB11Q96P15 392 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TRIM62Q9BVG3 475 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SGK2Q9HBY8 427 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PRSS16Q9NQE7 514 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SCML1Q9UN30 329 aa15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FNDC3AQ9Y2H6 1198 aaKnown RBP15.18■□□□□ 0.02
SCARNA20.5-201ENST00000516991 A0A1B0GVT2 93 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 BRD2P25440 801 aaKnown RBP15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ACSL1P33121 698 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SGSHP51688 502 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ST8SIA6P61647 398 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 RPS14P62263 151 aaKnown RBP15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 BNC1Q01954 994 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 GCNT1Q02742 428 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SUZ12Q15022 739 aaKnown RBP15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FAM133BQ5BKY9 247 aaKnown RBP15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PMF1Q6P1K2 205 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 RFWD3Q6PCD5 774 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FOXR2Q6PJQ5 311 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 MFN1Q8IWA4 741 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CCDC117Q8IWD4 279 aaPredicted RBP15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ZNF366Q8N895 744 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 KDM1BQ8NB78 822 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ENGASEQ8NFI3 743 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 C6orf106Q9H6K1 298 aaPredicted RBP15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 IL21RQ9HBE5 538 aa15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 KIAA1522Q9P206 1035 aaPredicted RBP15.17■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CD27P26842 260 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CD70P32970 193 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 MEA1Q16626 185 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 INAVAQ3KP66 663 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 USP30Q70CQ3 517 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PROSER1Q86XN7 944 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FIBINQ8TAL6 211 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 BAHD1Q8TBE0 780 aaPredicted RBP15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 WFDC5Q8TCV5 224 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PRICKLE1Q96MT3 831 aaPredicted RBP15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 RSPH9Q9H1X1 276 aaPredicted RBP15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TM9SF3Q9HD45 589 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 RALYQ9UKM9 306 aaKnown RBP15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 TLR6Q9Y2C9 796 aa15.16■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SPEGQ15772 3267 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ACACAQ13085 2346 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ATRXP46100 2492 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 BICDL2A1A5D9 508 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PIK3R2O00459 728 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 RNASEH1O60930 286 aaKnown RBP15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 GABBR2O75899 941 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 SLC6A4P31645 630 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ACADSBP45954 432 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CSNK1EP49674 416 aaKnown RBP15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CCT8P50990 548 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CDH18Q13634 790 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ARID5BQ14865 1188 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CCNI2Q6ZMN8 369 aaPredicted RBP15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 DBX2Q6ZNG2 339 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 BEND5Q7L4P6 421 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ELOA2Q8IYF1 753 aaPredicted RBP15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 DQX1Q8TE96 717 aaKnown RBP15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 CLEC4CQ8WTT0 213 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 IGSF8Q969P0 613 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FAM149B1Q96BN6 582 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 BIRC7Q96CA5 298 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 FCRL2Q96LA5 508 aaPredicted RBP15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ZSWIM1Q9BR11 485 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 MIS12Q9H081 205 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 PABPC3Q9H361 631 aaKnown RBP15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 STIM2Q9P246 746 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ANKRD6Q9Y2G4 727 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 DMXL2Q8TDJ6 3036 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 ASPMQ8IZT6 3477 aa15.15■□□□□ 0.02
SCARNA20.5-201ENST00000516991 GOLGA6L7A0A1B0GV03 622 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 RNF225M0QZC1 329 aaPredicted RBP15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 DFNA5O60443 496 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 FSBPO95073 299 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 MOCS3O95396 460 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 GNA14O95837 355 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 APOEP02649 317 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 CSKP41240 450 aa15.14■□□□□ 0.01
SCARNA20.5-201ENST00000516991 GRK6P43250 576 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms