RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SLC39A10Q9ULF5 831 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 CEP83Q9Y592 693 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 PCDHGB2Q9Y5G2 931 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 NOTCH4Q99466 2003 aa3.7□□□□□ -1.82
HERC4-215ENST00000515753 CFTRP13569 1480 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 FANCD2Q9BXW9 1451 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 FAM90A10PA6NDY2 464 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 CYSRT1A8MQ03 144 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 TTC34A8MYJ7 566 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 H3BNX3 289 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 PRYO14603 147 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 RRHO14718 337 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 NPC1O15118 1278 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 ANXA6P08133 673 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 IGFBP2P18065 325 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 ABCB4P21439 1286 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 PPM1AP35813 382 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 THBS3P49746 956 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 HTR6P50406 440 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 NANOS2P60321 138 aaKnown RBP3.69□□□□□ -1.82
HERC4-215ENST00000515753 DMWDQ09019 674 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 PFKFB3Q16875 520 aaPredicted RBP3.69□□□□□ -1.82
HERC4-215ENST00000515753 FAM110CQ1W6H9 321 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 LEXMQ3ZCV2 418 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 TRIM60Q495X7 471 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 ANO1Q5XXA6 986 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 XRRA1Q6P2D8 792 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 PIP4P1Q86T03 277 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 TTC30AQ86WT1 665 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 CPXCR1Q8N123 301 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 PAF1Q8N7H5 531 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 WIPF2Q8TF74 440 aaPredicted RBP3.69□□□□□ -1.82
HERC4-215ENST00000515753 NPIPB3Q92617 1050 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 EID2BQ96D98 161 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 C18orf8Q96DM3 657 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 FCRL5Q96RD9 977 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 AGO4Q9HCK5 861 aaKnown RBP3.69□□□□□ -1.82
HERC4-215ENST00000515753 PI4KBQ9UBF8 816 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 SQORQ9Y6N5 450 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 WDR62O43379 1518 aa3.69□□□□□ -1.82
HERC4-215ENST00000515753 MROH2BQ7Z745 1585 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 ZMYM2Q9UBW7 1377 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 LOC105369274A0A096LPK9 316 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 LOC102723532A0A0G2JNH3 316 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 C16orf96A6NNT2 1141 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 J3KTA2 159 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 M0QZQ0 153 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 INPPL1O15357 1258 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 TLR2O60603 784 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 TAF5LO75529 589 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 PLAUP00749 431 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 SETSIPP0DME0 302 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 CTSAP10619 480 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 RPS6KB1P23443 525 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 SERPINB3P29508 390 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 SLC8A1P32418 973 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 TECP42680 631 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 CDK7P50613 346 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 ZNF84P51523 738 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 SLC12A2P55011 1212 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 ID2Q02363 134 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 CBFBQ13951 182 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 KPNB1Q14974 876 aaKnown RBP3.68□□□□□ -1.82
HERC4-215ENST00000515753 RBM44Q6ZP01 1051 aaKnown RBP3.68□□□□□ -1.82
HERC4-215ENST00000515753 TFAP2DQ7Z6R9 452 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 PCGF5Q86SE9 256 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 TRABD2AQ86V40 505 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 GATAD2AQ86YP4 633 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 RFX6Q8HWS3 928 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 SYTL1Q8IYJ3 562 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 C16orf71Q8IYS4 520 aaPredicted RBP3.68□□□□□ -1.82
HERC4-215ENST00000515753 OR4N4Q8N0Y3 316 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 NME8Q8N427 588 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 ANKRD42Q8N9B4 389 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 ZNF548Q8NEK5 533 aaPredicted RBP3.68□□□□□ -1.82
HERC4-215ENST00000515753 FAM71BQ8TC56 605 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 UBE2Q2Q8WVN8 375 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 ZFPM2Q8WW38 1151 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 FAR2Q96K12 515 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 FBXO28Q9NVF7 368 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 IGSF9Q9P2J2 1179 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 LZTS1Q9Y250 596 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 PCDHB7Q9Y5E2 793 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 PCDHB2Q9Y5E7 798 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 ABCC8Q09428 1581 aa3.68□□□□□ -1.82
HERC4-215ENST00000515753 THOC2Q8NI27 1593 aaKnown RBP3.68□□□□□ -1.82
HERC4-215ENST00000515753 A0A087WV62 115 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 PNMA6EA0A0J9YXQ4 647 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 ABHD14A-ACY1A0A1B0GW23 586 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 SYT5O00445 386 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 NKX2-8O15522 239 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 CRYABP02511 175 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 SLC3A2P08195 630 aaKnown RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 SRGAP2BP0DMP2 458 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 PSG1P11464 419 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 TFEBP19484 476 aa3.67□□□□□ -1.82
HERC4-215ENST00000515753 HOXA7P31268 230 aaPredicted RBP3.67□□□□□ -1.82
HERC4-215ENST00000515753 IDUAP35475 653 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms