RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 CCDC60Q8IWA6 550 aaPredicted RBP13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 FBXW8Q8N3Y1 598 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 PBXIP1Q96AQ6 731 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 RCN3Q96D15 328 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 NACA2Q9H009 215 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 DOLKQ9UPQ8 538 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 STRCP1A6NGW2 1772 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 SIGLEC16A6NMB1 481 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 CHADO15335 359 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 ITM2AO43736 263 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 EIF4BP23588 611 aaKnown RBP13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 TMEM62Q0P6H9 643 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 PLEKHH3Q7Z736 793 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 RELL1Q8IUW5 271 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 RMND5BQ96G75 393 aaPredicted RBP13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 RRN3Q9NYV6 651 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 SORCS3Q9UPU3 1222 aa13.95□□□□□ -0.18
SH3TC1-225ENST00000515682 TRDMT1O14717 391 aaKnown RBP13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 OATP04181 439 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 LAMC2Q13753 1193 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 MXD4Q14582 209 aaPredicted RBP13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 GNASQ5JWF2 1037 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 CATSPERGQ6ZRH7 1159 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 PATL1Q86TB9 770 aaKnown RBP13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 CNDP1Q96KN2 507 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 CCDC28BQ9BUN5 200 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 IL1R2P27930 398 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 NME5P56597 212 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 ITPRIPL1Q6GPH6 555 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 DRICH1Q6PGQ1 229 aaPredicted RBP13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 FAM156AQ8NDB6 213 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 PDCD6IPQ8WUM4 868 aaKnown RBP13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 CCDC90BQ9GZT6 254 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 PSMD13Q9UNM6 376 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 CYP2F1P24903 491 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 OAZ1P54368 228 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 NR1H2P55055 460 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 TNFAIP2Q03169 654 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 DGKDQ16760 1214 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 ARCQ7LC44 396 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 UNC5BQ8IZJ1 945 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 DDHD1Q8NEL9 900 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 WDR41Q9HAD4 459 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 SNX9Q9Y5X1 595 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 TAF1P21675 1872 aa13.94□□□□□ -0.18
SH3TC1-225ENST00000515682 OGTO15294 1046 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 HBP1O60381 514 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 TRMUO75648 421 aaKnown RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 ZNF189O75820 626 aaPredicted RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 SORBS2O94875 1100 aaKnown RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 EGFRP00533 1210 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 C4BPAP04003 597 aaKnown RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 TGM2P21980 687 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 ITKQ08881 620 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 SREBF2Q12772 1141 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 EFCAB12Q6NXP0 572 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 PDSS2Q86YH6 399 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 FAM136AQ96C01 138 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 TLE6Q9H808 572 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 CYP4F12Q9HCS2 524 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 PTTG2Q9NZH5 202 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 COL16A1Q07092 1604 aaPredicted RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 A0A096LPK6 155 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 KLF10Q13118 480 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 GOLGA7BQ2TAP0 167 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 SIAH1Q8IUQ4 282 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 NUP93Q8N1F7 819 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 COLGALT1Q8NBJ5 622 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 TFAP2BQ92481 460 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 LENG8Q96PV6 779 aaPredicted RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 CPXM1Q96SM3 734 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 LIN28AQ9H9Z2 209 aaKnown RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 ARHGEF38Q9NXL2 777 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 KANSL3Q9P2N6 904 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 TSC22D4Q9Y3Q8 395 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 NR2E3Q9Y5X4 410 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 CRABP2P29373 138 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 FAM131BQ86XD5 332 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 TFB1MQ8WVM0 346 aaKnown RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 EBNA1BP2Q99848 306 aaKnown RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 MRPS26Q9BYN8 205 aaKnown RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 COG4Q9H9E3 785 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 CYLDQ9NQC7 956 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 LRFN2Q9ULH4 789 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 TRIM13O60858 407 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 PDGFRBP09619 1106 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 SUPT20HL2P0C7V6 817 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 CXCL8P10145 99 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 ZFXP17010 805 aaPredicted RBP13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 NAMPTP43490 491 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 JAG1P78504 1218 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 CMPK2Q5EBM0 449 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 GLRA4Q5JXX5 417 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 KLHDC10Q6PID8 442 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 DNERQ8NFT8 737 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 USP33Q8TEY7 942 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 SLC4A5Q9BY07 1137 aa13.93□□□□□ -0.18
SH3TC1-225ENST00000515682 ADNPQ9H2P0 1102 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms