RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 OPHN1O60890 802 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 EPHB2P29323 1055 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 USP46P62068 366 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 WASHC5Q12768 1159 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 RASA2Q15283 850 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 TMED2Q15363 201 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.91■□□□□ 0.145e-9■■■■■ 48.7
THUMPD3-210ENST00000515662 DENND5BQ6ZUT9 1274 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 TAS1R1Q7RTX1 841 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 FBF1Q8TES7 1133 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 HAPLN3Q96S86 360 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 IL37Q9NZH6 218 aa15.91■□□□□ 0.14
THUMPD3-210ENST00000515662 MYO16Q9Y6X6 1858 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 H7C4K7 107 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 NCAM2O15394 837 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 CPB1P15086 417 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 ATP2A2P16615 1042 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 CCR1P32246 355 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 FDFT1P37268 417 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 MAGEA3P43357 314 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 GEMIN4P57678 1058 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 GPR17Q13304 367 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 ZNF534Q76KX8 674 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 COLGALT1Q8NBJ5 622 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 ATXN2LQ8WWM7 1075 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 XPO6Q96QU8 1125 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 SEPT10Q9P0V9 454 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 NUDT5Q9UKK9 219 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 PLXNA3P51805 1871 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 FNDC1Q4ZHG4 1894 aaPredicted RBP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 MTMR11A4FU01 709 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 ZNF189O75820 626 aaPredicted RBP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 VNN2O95498 520 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 CORO7P57737 925 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 GALNT2Q10471 571 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 NR1H3Q13133 447 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 PPP2R5DQ14738 602 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 EFTUD2Q15029 972 aaKnown RBP eCLIP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 C1orf53Q5VUE5 145 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 RNF19BQ6ZMZ0 732 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 ARHGAP18Q8N392 663 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 GPR152Q8TDT2 470 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 TTPALQ9BTX7 342 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 CEP41Q9BYV8 373 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 INTS9Q9NV88 658 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 GMIPQ9P107 970 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 TBX21Q9UL17 535 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 NEU3Q9UQ49 428 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 SLC27A5Q9Y2P5 690 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 ACTL7BQ9Y614 415 aa15.9■□□□□ 0.14
THUMPD3-210ENST00000515662 PAGE1O75459 146 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SOAT2O75908 522 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 UPP2O95045 317 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 PPIDQ08752 370 aaKnown RBP15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 KLHL38Q2WGJ6 581 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 MSANTD2Q6P1R3 559 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 ANKS3Q6ZW76 656 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 PACS2Q86VP3 889 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 NLRP14Q86W24 1093 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SRRM1Q8IYB3 904 aaKnown RBP15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 ZNF567Q8N184 647 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SPPL2BQ8TCT7 592 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 DHRS4Q9BTZ2 278 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 BRD8Q9H0E9 1235 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SIK2Q9H0K1 926 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 CRISPLD1Q9H336 500 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 PSMC3IPQ9P2W1 217 aaPredicted RBP15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 TMEM120BA0PK00 339 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 FAM92AA1XBS5 289 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 GMNCA6NCL1 334 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 KCNU1A8MYU2 1149 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 NDUFAB1O14561 156 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SPAG6O75602 509 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SRGAP2BP0DMP2 458 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 BRAFP15056 766 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 MX2P20592 715 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SERPINB6P35237 376 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SLC20A2Q08357 652 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 TRABD2AQ86V40 505 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 DIS3LQ8TF46 1054 aaKnown RBP15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 LRRC39Q96DD0 335 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 VWCEQ96DN2 955 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 SERPINB11Q96P15 392 aa15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 XAB2Q9HCS7 855 aaKnown RBP15.89■□□□□ 0.13
THUMPD3-210ENST00000515662 TCRBV9S1A1TA0A576 114 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 RASA4BC9J798 803 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 F5H423 210 aaPredicted RBP15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 KCNK1O00180 336 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 RASA4O43374 803 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 EFEMP2O95967 443 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 CDK16Q00536 496 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 SMARCB1Q12824 385 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 IKBKEQ14164 716 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 PARP6Q2NL67 630 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 ARTNQ5T4W7 220 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 MANEALQ5VSG8 457 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 RWDD4Q6NW29 188 aaKnown RBP15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 PRSS55Q6UWB4 352 aaPredicted RBP15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 HDAC11Q96DB2 347 aa15.88■□□□□ 0.13
THUMPD3-210ENST00000515662 MRRFQ96E11 262 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms