RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 HOXD9P28356 352 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 PTGER1P34995 402 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 RPL15P61313 204 aaKnown RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 AP2B1P63010 937 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 RBM6P78332 1123 aaKnown RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 TLE3Q04726 772 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 DMWDQ09019 674 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 GALNT1Q10472 559 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 RPS6KA2Q15349 733 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 ZNF425Q6IV72 752 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 TMEM88Q6PEY1 159 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC39A5Q6ZMH5 540 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM57BQ71RH2 274 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 RAB11FIP2Q7L804 512 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 MRPL10Q7Z7H8 261 aaKnown RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 ANKRD13BQ86YJ7 626 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 RHPN2Q8IUC4 686 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 SCNM1Q9BWG6 230 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 SPRTNQ9H040 489 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 SFXN1Q9H9B4 322 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 ERVK-5Q9HDB9 667 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 MTMR4Q9NYA4 1195 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 TRPC5Q9UL62 973 aaPredicted RBP5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 CNTN6Q9UQ52 1028 aa5.43□□□□□ -1.54
SMARCA5-203ENST00000515531 SETD1BQ9UPS6 1966 aaKnown RBP5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 C2CD4BA6NLJ0 364 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 KAT7O95251 611 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 SGPL1O95470 568 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 PEPDP12955 493 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 SOX2P48431 317 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC37A1P57057 533 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 TAS2R50P59544 299 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 TRIM60Q495X7 471 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 C10orf25Q5T742 122 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 LIPMQ5VYY2 423 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 C11orf87Q6NUJ2 197 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 NFRKBQ6P4R8 1299 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 DEF8Q6ZN54 512 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 RINLQ6ZS11 566 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 C1QL2Q7Z5L3 287 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM47BQ8NA70 645 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 C16orf52Q8NHV5 167 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 COQ8BQ96D53 544 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 TMEM79Q9BSE2 394 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 MECRQ9BV79 373 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 GATA5Q9BWX5 397 aaPredicted RBP5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 MLXIPLQ9NP71 852 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 TMEM45AQ9NWC5 275 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 ELOVL5Q9NYP7 299 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC8A2Q9UPR5 921 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 ZNF521Q96K83 1311 aa5.42□□□□□ -1.54
SMARCA5-203ENST00000515531 INO80B-WBP1J3KQ70 363 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 ACKR2O00590 384 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 TLR2O60603 784 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 PEX14O75381 377 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 MOSPD3O75425 235 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 CNTN5O94779 1100 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 CYP3A4P08684 503 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 RFPL3SP0C7P2 107 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 CYP19A1P11511 503 aaPredicted RBP5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 TGM2P21980 687 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 RBMS2Q15434 407 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 PDCD2Q16342 344 aaPredicted RBP5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 C10orf62Q5T681 223 aaPredicted RBP5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 SULT6B1Q6IMI4 303 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 ZNF793Q6ZN11 406 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC44A2Q8IWA5 706 aaPredicted RBP5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 OR1N1Q8NGS0 311 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 CPT1BQ92523 772 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 PAGR1Q9BTK6 254 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 TUBB6Q9BUF5 446 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 HTATIP2Q9BUP3 242 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 TMEM120AQ9BXJ8 343 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 ELAC1Q9H777 363 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 MOV10Q9HCE1 1003 aaKnown RBP5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 TNFRSF18Q9Y5U5 241 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 ZMYM2Q9UBW7 1377 aa5.41□□□□□ -1.54
SMARCA5-203ENST00000515531 hCG_1642624A0A1W2PR95 340 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM90A18PA6NE21 464 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM90A16PA6NEW6 464 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM90A9PA6NNJ1 464 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 SLC38A8A6NNN8 435 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM90A5PA8MXJ8 464 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 UGDHO60701 494 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 LDHAP00338 332 aaKnown RBP5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM90A15PP0C7V4 464 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 FAM90A14PP0C7W9 464 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 TBRG1Q3YBR2 411 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 PAPD7Q5XG87 772 aaKnown RBP5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 CCDC174Q6PII3 467 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 ARL14EPQ8N8R7 260 aaPredicted RBP5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 C3orf49Q96BT1 292 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 PABPC3Q9H361 631 aaKnown RBP5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 PRDM8Q9NQV8 689 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 PAPOLBQ9NRJ5 636 aaKnown RBP5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 BAG5Q9UL15 447 aa5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 C19orf53Q9UNZ5 99 aaPredicted RBP5.4□□□□□ -1.54
SMARCA5-203ENST00000515531 CYP3A7-CYP3A51PA0A087WV96 503 aa5.39□□□□□ -1.55
SMARCA5-203ENST00000515531 DPPA5A6NC42 116 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms