RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 M0QYT0 321 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 ZBTB24O43167 697 aaPredicted RBP13.23□□□□□ -0.29
CLCN3-210ENST00000515420 SERPINC1P01008 464 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 TACR2P21452 398 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 NSFP46459 744 aaKnown RBP13.23□□□□□ -0.29
CLCN3-210ENST00000515420 CXCR3P49682 368 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 SRSF5Q13243 272 aaKnown RBP13.23□□□□□ -0.29
CLCN3-210ENST00000515420 STARD3Q14849 445 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 NR1I3Q14994 352 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 CLEC16AQ2KHT3 1053 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 RABGAP1LQ5R372 815 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 OTUD1Q5VV17 481 aaPredicted RBP13.23□□□□□ -0.29
CLCN3-210ENST00000515420 MMS22LQ6ZRQ5 1243 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 SND1Q7KZF4 910 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■□□□□ 11.2
CLCN3-210ENST00000515420 BNIPLQ7Z465 357 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 LUZP1Q86V48 1076 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 CHSY1Q86X52 802 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 PHF13Q86YI8 300 aaPredicted RBP13.23□□□□□ -0.29
CLCN3-210ENST00000515420 RNF34Q969K3 372 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 IQCDQ96DY2 449 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 SPACA7Q96KW9 195 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 ACOX2Q99424 681 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 ABCB8Q9NUT2 735 aa13.23□□□□□ -0.29
CLCN3-210ENST00000515420 BCCIPQ9P287 314 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLCN3-210ENST00000515420 XPO7Q9UIA9 1087 aaKnown RBP13.23□□□□□ -0.29
CLCN3-210ENST00000515420 A0A1B0GVM2 712 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 GOLGA6L19H0YKK7 550 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 HAX1O00165 279 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 FOXD2O60548 495 aaPredicted RBP13.22□□□□□ -0.29
CLCN3-210ENST00000515420 RHOBTB1O94844 696 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 LUC7L3O95232 432 aaKnown RBP13.22□□□□□ -0.29
CLCN3-210ENST00000515420 CALB1P05937 261 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 ATP5BP06576 529 aaKnown RBP13.22□□□□□ -0.29
CLCN3-210ENST00000515420 GABRG2P18507 467 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 FLT3P36888 993 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 P2RY2P41231 377 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 SULT1E1P49888 294 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 OXCT1P55809 520 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 RPS24P62847 133 aaKnown RBP13.22□□□□□ -0.29
CLCN3-210ENST00000515420 ARID5AQ03989 594 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 NME3Q13232 169 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 SLC12A1Q13621 1099 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 CDH18Q13634 790 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 ZNF234Q14588 700 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 ELF2Q15723 593 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 PLK5Q496M5 336 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 TMEM215Q68D42 235 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 CHST9Q7L1S5 443 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 ADIPOR2Q86V24 386 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 LGI2Q8N0V4 545 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 FAM160A2Q8N612 972 aaPredicted RBP13.22□□□□□ -0.29
CLCN3-210ENST00000515420 WFDC5Q8TCV5 224 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 HMGB4Q8WW32 186 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 LMLNQ96KR4 655 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
CLCN3-210ENST00000515420 AGPAT1Q99943 283 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 SYT11Q9BT88 431 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 TPSD1Q9BZJ3 242 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 CIPCQ9C0C6 399 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 WDCPQ9H6R7 721 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 PIGVQ9NUD9 493 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 ARHGEF38Q9NXL2 777 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 CACNA2D2Q9NY47 1150 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 PCDHGA5Q9Y5G8 931 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 STON1Q9Y6Q2 735 aa13.22□□□□□ -0.29
CLCN3-210ENST00000515420 THADAQ6YHU6 1953 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 SYNJ2BP-COX16A0A087WUM0 186 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 GOLGA8SH3BPF8 625 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 ZNF217O75362 1048 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 ENDOD1O94919 500 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 EPN2O95208 641 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 MOCS3O95396 460 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 ASLP04424 464 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 DLDP09622 509 aaKnown RBP13.21□□□□□ -0.29
CLCN3-210ENST00000515420 C7P10643 843 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 POLR2EP19388 210 aaKnown RBP13.21□□□□□ -0.29
CLCN3-210ENST00000515420 PRKCIP41743 596 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 IL12RB1P42701 662 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 RNASE9P60153 205 aaKnown RBP13.21□□□□□ -0.29
CLCN3-210ENST00000515420 FANCCQ00597 558 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 DEUP1Q05D60 604 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 PTP4A2Q12974 167 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 C5orf22Q49AR2 442 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 PMS2CLQ68D20 193 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 MBLAC2Q68D91 279 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 MON1BQ7L1V2 547 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 IRF2BP2Q7Z5L9 587 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 METTL3Q86U44 580 aaKnown RBP13.21□□□□□ -0.29
CLCN3-210ENST00000515420 KBTBD6Q86V97 674 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 KDM1BQ8NB78 822 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 C3orf20Q8ND61 904 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 SLC30A5Q8TAD4 765 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 TTC17Q96AE7 1141 aa13.21□□□□□ -0.29
CLCN3-210ENST00000515420 MYEOVQ96EZ4 313 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms