RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RSAD2Q8WXG1 361 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 KRT35Q92764 455 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 KCTD15Q96SI1 283 aaPredicted RBP21.68■■□□□ 1.06
LSM6-207ENST00000515311 LINC00597Q9H2U6 94 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 RCOR3Q9P2K3 495 aaPredicted RBP21.68■■□□□ 1.06
LSM6-207ENST00000515311 SNX10Q9Y5X0 201 aa21.68■■□□□ 1.06
LSM6-207ENST00000515311 ZNF487B1APH4 448 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 E9PAM4 449 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 FAM72CH0Y354 149 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 NFATC1O95644 943 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 GDI1P31150 447 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 HCAR3P49019 387 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 GNG11P61952 73 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 RABGAP1LQ5R372 815 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 ARTNQ5T4W7 220 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 FAM72AQ5TYM5 149 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 FAM72DQ6L9T8 149 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 FBXL22Q6P050 247 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 RFWD3Q6PCD5 774 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 FAM72BQ86X60 149 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 MAP7D3Q8IWC1 876 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 LGI2Q8N0V4 545 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 SLC35F6Q8N357 371 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 SLC44A3Q8N4M1 653 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 KCTD6Q8NC69 237 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 HJURPQ8NCD3 748 aaPredicted RBP21.67■■□□□ 1.06
LSM6-207ENST00000515311 EXD1Q8NHP7 514 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 IRF7Q92985 503 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 ZFYVE19Q96K21 471 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 PRICKLE1Q96MT3 831 aaPredicted RBP21.67■■□□□ 1.06
LSM6-207ENST00000515311 MAGEB5Q9BZ81 275 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 PCDH18Q9HCL0 1135 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 SPHK2Q9NRA0 654 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 MARK1Q9P0L2 795 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 PPARGC1AQ9UBK2 798 aaKnown RBP21.67■■□□□ 1.06
LSM6-207ENST00000515311 VANGL2Q9ULK5 521 aa21.67■■□□□ 1.06
LSM6-207ENST00000515311 PACSIN2Q9UNF0 486 aaPredicted RBP21.67■■□□□ 1.06
LSM6-207ENST00000515311 DRGXA6NNA5 263 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 H3BRJ5 948 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 ARNTLO00327 626 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 DDX3YO15523 660 aaKnown RBP21.66■■□□□ 1.06
LSM6-207ENST00000515311 LRIG2O94898 1065 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 ADH1CP00326 375 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 KRT1P04264 644 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 CYBBP04839 570 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 HOXC13P31276 330 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 GGCXP38435 758 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 VCPP55072 806 aaKnown RBP21.66■■□□□ 1.06
LSM6-207ENST00000515311 CDH6P55285 790 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 RWDD2BP57060 319 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 KRT81Q14533 505 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 RPS6KA1Q15418 735 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 MPPE1Q53F39 396 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 PPP6R3Q5H9R7 873 aaPredicted RBP21.66■■□□□ 1.06
LSM6-207ENST00000515311 MPP7Q5T2T1 576 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 ZFYVE27Q5T4F4 411 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 NYAP1Q6ZVC0 841 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 C14orf80Q86SX3 495 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 TSC1Q92574 1164 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 ALG3Q92685 438 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 ZNF670Q9BS34 389 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 TLR10Q9BXR5 811 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 RETREG1Q9H6L5 497 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 TRPV5Q9NQA5 729 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 NEU3Q9UQ49 428 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 COL4A2P08572 1712 aa21.66■■□□□ 1.06
LSM6-207ENST00000515311 TICRRQ7Z2Z1 1910 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 TYW5A2RUC4 315 aaKnown RBP21.65■■□□□ 1.06
LSM6-207ENST00000515311 LRRD1A4D1F6 860 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 SRGAP2O75044 1071 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 ZRANB2O95218 330 aaKnown RBP eCLIP21.65■■□□□ 1.06
LSM6-207ENST00000515311 CYP17A1P05093 508 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 ASGR2P07307 311 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 ARSAP15289 507 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 KDELR1P24390 212 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 ARL4AP40617 200 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 TPI1P60174 286 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 DPYSL3Q14195 570 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 ODF2Q5BJF6 829 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 TRIM68Q6AZZ1 485 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 RHBDF2Q6PJF5 856 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 TMEM25Q86YD3 366 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 RCOR2Q8IZ40 523 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 CPA6Q8N4T0 437 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 RAPGEF5Q92565 580 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 IGSF8Q969P0 613 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 TBC1D31Q96DN5 1066 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 TMA16Q96EY4 203 aaKnown RBP21.65■■□□□ 1.06
LSM6-207ENST00000515311 RBM41Q96IZ5 413 aaKnown RBP21.65■■□□□ 1.06
LSM6-207ENST00000515311 RPRD1AQ96P16 312 aaPredicted RBP21.65■■□□□ 1.06
LSM6-207ENST00000515311 EBF3Q9H4W6 596 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 BRD9Q9H8M2 597 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 HPS4Q9NQG7 708 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 KLHL11Q9NVR0 708 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 COL4A3Q01955 1670 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 MYO10Q9HD67 2058 aa21.65■■□□□ 1.06
LSM6-207ENST00000515311 C3orf70A6NLC5 250 aaPredicted RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 EEF2KO00418 725 aaKnown RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 TRDMT1O14717 391 aaKnown RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 FGF10O15520 208 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms