RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 RGS16O15492 202 aaPredicted RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 KCNN4O15554 427 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 OPHN1O60890 802 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 CDH16O75309 829 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 SPAG6O75602 509 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 GSTA2P09210 222 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 HAPLN1P10915 354 aaPredicted RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 MLNP12872 115 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 CCR1P32246 355 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 SERPINB6P35237 376 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 ALDH7A1P49419 539 aaKnown RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 WDR5P61964 334 aaKnown RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 NR1H3Q13133 447 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 NME3Q13232 169 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 SEMA5AQ13591 1074 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 AUHQ13825 339 aaKnown RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 USP41Q3LFD5 358 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 MANEALQ5VSG8 457 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 CYS1Q717R9 158 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 TMCO2Q7Z6W1 182 aaPredicted RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 PRUNE1Q86TP1 453 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 TAC4Q86UU9 113 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 PYROXD2Q8N2H3 581 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 SCAMP5Q8TAC9 235 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 HTR3CQ8WXA8 447 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 SLC39A13Q96H72 371 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 SERPINB11Q96P15 392 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 VAT1Q99536 393 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 TTLL2Q9BWV7 592 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 RHOBTB2Q9BYZ6 727 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 KLC2Q9H0B6 622 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 TKTL2Q9H0I9 626 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 RETREG1Q9H6L5 497 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 CWH43Q9H720 699 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 IL23AQ9NPF7 189 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 EIF2B3Q9NR50 452 aaKnown RBP10.53□□□□□ -0.72
SNF8-214ENST00000515174 EURLQ9NYK6 297 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 DONSONQ9NYP3 566 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 MTRRQ9UBK8 725 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 STK39Q9UEW8 545 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 OR12D3Q9UGF7 316 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 SLC24A2Q9UI40 661 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 A0A0A0MRY4 1105 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 MTMR11A4FU01 709 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 FGF10O15520 208 aaPredicted RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 STK10O94804 968 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 FGBP02675 491 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 ZDHHC11BP0C7U3 371 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 ERCC2P18074 760 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 YWHAQP27348 245 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 PHBP35232 272 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 MAGEA3P43357 314 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 MMP13P45452 471 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 TUFMP49411 452 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 CDR1P51861 262 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 GYS2P54840 703 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 MLLT6P55198 1093 aaPredicted RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 TPI1P60174 286 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 PPP2R2AP63151 447 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 PPIDQ08752 370 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 PARP6Q2NL67 630 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 SNX30Q5VWJ9 437 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 KCTD16Q68DU8 428 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 HEATR6Q6AI08 1181 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 DENND5BQ6ZUT9 1274 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 C16orf59Q7L2K0 433 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 KLHDC8BQ8IXV7 354 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 ATP11CQ8NB49 1132 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 OVCA2Q8WZ82 227 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 EDEM1Q92611 657 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 HDAC11Q96DB2 347 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 IGSF21Q96ID5 467 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 SPATA13Q96N96 652 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 TSGA13Q96PP4 275 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 CDK5RAP1Q96SZ6 601 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 CAPS2Q9BXY5 557 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 MAGEB5Q9BZ81 275 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 RC3H2Q9HBD1 1191 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 LRRC4CQ9HCJ2 640 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 SAYSD1Q9NPB0 183 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 ANLNQ9NQW6 1124 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 ETNK2Q9NVF9 386 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 ABI2Q9NYB9 513 aaPredicted RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 CXXC1Q9P0U4 656 aaPredicted RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 IGSF9Q9P2J2 1179 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 XPO7Q9UIA9 1087 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 NOVA2Q9UNW9 492 aaKnown RBP10.52□□□□□ -0.73
SNF8-214ENST00000515174 TLR6Q9Y2C9 796 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 TEX264Q9Y6I9 313 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 PLXNA3P51805 1871 aa10.52□□□□□ -0.73
SNF8-214ENST00000515174 CDH23Q9H251 3354 aa10.51□□□□□ -0.73
SNF8-214ENST00000515174 ZBBXA8MT70 800 aa10.51□□□□□ -0.73
SNF8-214ENST00000515174 FAM72CH0Y354 149 aa10.51□□□□□ -0.73
SNF8-214ENST00000515174 TRDMT1O14717 391 aaKnown RBP10.51□□□□□ -0.73
SNF8-214ENST00000515174 CREB3O43889 395 aa10.51□□□□□ -0.73
SNF8-214ENST00000515174 FAM155BO75949 473 aa10.51□□□□□ -0.73
SNF8-214ENST00000515174 BAIAP3O94812 1187 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms