RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 THEGQ9P2T0 379 aa6.32□□□□□ -1.4
ATP2C1-222ENST00000514654 PCYOX1Q9UHG3 505 aa6.32□□□□□ -1.4
ATP2C1-222ENST00000514654 DRG1Q9Y295 367 aaKnown RBP6.32□□□□□ -1.4
ATP2C1-222ENST00000514654 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 BTNL10A8MVZ5 291 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 B4GALT4O60513 344 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 CLASP2O75122 1294 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 GUCA1CO95843 209 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 APOA4P06727 396 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 RPA3P35244 121 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 KCNK10P57789 538 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MAXP61244 160 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SP2Q02086 613 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 FAM182AQ5T1J6 154 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 LRRC38Q5VT99 294 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SPRYD7Q5W111 196 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SEL1L3Q68CR1 1132 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 CYB5D1Q6P9G0 228 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 FOXR2Q6PJQ5 311 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 BBS12Q6ZW61 710 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 CPNE8Q86YQ8 564 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 POU5F2Q8N7G0 328 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TFAP2BQ92481 460 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MAML3Q96JK9 1138 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 CENPKQ9BS16 269 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 APOBEC3GQ9HC16 384 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 NOD2Q9HC29 1040 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 HPS4Q9NQG7 708 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ABCC13Q9NSE7 274 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 KIF17Q9P2E2 1029 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SYCE1LA8MT33 242 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ZSCAN9O15535 394 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MGEA5O60502 916 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 FKBP9O95302 570 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 PGAM1P18669 254 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 NFKB1P19838 968 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ITGALP20701 1170 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 HNRNPH1P31943 449 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SPDYE7PQ495Y7 208 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 C16orf89Q6UX73 402 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ZNF662Q6ZS27 426 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 FKBP9P1Q75LS8 142 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ALLCQ8N6M5 410 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 DEFB118Q96PH6 123 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TBC1D13Q9NVG8 400 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 CDH9Q9ULB4 789 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 NR2E1Q9Y466 385 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 A0A0A0MRY4 1105 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ARHGAP10A1A4S6 786 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MYO1GB0I1T2 1018 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 NQO1P15559 274 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SPIRE1Q08AE8 756 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ITGA7Q13683 1181 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 PTK2BQ14289 1009 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MTFR1Q15390 333 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TAF5Q15542 800 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TTLL9Q3SXZ7 439 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 RETSATQ6NUM9 610 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 APTXQ7Z2E3 356 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 HERC6Q8IVU3 1022 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SUGP1Q8IWZ8 645 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TMEM192Q8IY95 271 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TDRD5Q8NAT2 981 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 CEP70Q8NHQ1 597 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ZNF75CPQ92670 426 aaPredicted RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 PGM2Q96G03 612 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 EXOC2Q96KP1 924 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SPATA13Q96N96 652 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ADGRE3Q9BY15 652 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 KDM4CQ9H3R0 1056 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 RIC8BQ9NVN3 520 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MPP6Q9NZW5 540 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SPASTQ9UBP0 616 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TRHDEQ9UKU6 1024 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 XRN1Q8IZH2 1706 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TRPC5OSA6NMA1 111 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 RBAK-RBAKDNI3L0D1 243 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 DDX3YO15523 660 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MSI1O43347 362 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TSPAN1O60635 241 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SPATA31D3P0C874 917 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 CKBP12277 381 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 EEF1DP29692 281 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 IFNA8P32881 189 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ICAM3P32942 547 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 ATP5C1P36542 298 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MMP13P45452 471 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TUFMP49411 452 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 FKBP1BP68106 108 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 MRPS5P82675 430 aaKnown RBP6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 NOGQ13253 232 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 IKBKEQ14164 716 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 FLOT2Q14254 428 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 INPP5AQ14642 412 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 RCN1Q15293 331 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 SPATA31D4Q6ZUB0 917 aa6.31□□□□□ -1.4
ATP2C1-222ENST00000514654 TEX9Q8N6V9 391 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms