RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 EOGTQ5NDL2 527 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 ACAD10Q6JQN1 1059 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 MMS22LQ6ZRQ5 1243 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 TPGS1Q6ZTW0 290 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 STRADAQ7RTN6 431 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 BNIPLQ7Z465 357 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 ANKS1BQ7Z6G8 1248 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 C12orf40Q86WS4 652 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 CCDC117Q8IWD4 279 aaPredicted RBP8.49□□□□□ -1.05
NEDD4-210ENST00000513957 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.49□□□□□ -1.05
NEDD4-210ENST00000513957 WFIKKN2Q8TEU8 576 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 DDI1Q8WTU0 396 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 UCMAQ8WVF2 138 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 CPA5Q8WXQ8 436 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 NELL1Q92832 810 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 TMA16Q96EY4 203 aaKnown RBP8.49□□□□□ -1.05
NEDD4-210ENST00000513957 C11orf70Q9BRQ4 267 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 XPO4Q9C0E2 1151 aaKnown RBP8.49□□□□□ -1.05
NEDD4-210ENST00000513957 RETREG1Q9H6L5 497 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 SEPT11Q9NVA2 429 aaKnown RBP8.49□□□□□ -1.05
NEDD4-210ENST00000513957 DCTN4Q9UJW0 460 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 CHD5Q8TDI0 1954 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 SPAG17Q6Q759 2223 aa8.49□□□□□ -1.05
NEDD4-210ENST00000513957 TBC1D3BA6NDS4 549 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 SIGLEC16A6NMB1 481 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 PROB1E7EW31 1015 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 F5H5T6 163 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 K7EQS6 105 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 M0QYT0 321 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 ENDOD1O94919 500 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 GYPCP04921 128 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 SP9P0CG40 484 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 KRT3P12035 628 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 TDGF1P13385 188 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 HOXD9P28356 352 aaPredicted RBP8.48□□□□□ -1.05
NEDD4-210ENST00000513957 SDC4P31431 198 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 RDXP35241 583 aaKnown RBP8.48□□□□□ -1.05
NEDD4-210ENST00000513957 FLT3P36888 993 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 CXCR3P49682 368 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 SULT1E1P49888 294 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 AIF1P55008 147 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 NHLH1Q02575 133 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 DEUP1Q05D60 604 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 PTP4A2Q12974 167 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 SLC12A1Q13621 1099 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 GAS6Q14393 721 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 TAF5Q15542 800 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 TDRD12Q587J7 1177 aaKnown RBP8.48□□□□□ -1.05
NEDD4-210ENST00000513957 MS4A13Q5J8X5 152 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 RABGAP1LQ5R372 815 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 PIK3R6Q5UE93 754 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 Q6ZS52 159 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 VSTM4Q8IW00 320 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 MAML2Q8IZL2 1156 aaPredicted RBP8.48□□□□□ -1.05
NEDD4-210ENST00000513957 AHI1Q8N157 1196 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 DEPDC4Q8N2C3 294 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 ZBTB44Q8NCP5 570 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 USP33Q8TEY7 942 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 FNIP1Q8TF40 1166 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 RNF34Q969K3 372 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 C1orf74Q96LT6 269 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 PPP1R9BQ96SB3 815 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 PCDHB18PQ96TA0 734 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 NCAPGQ9BPX3 1015 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 SELENOOQ9BVL4 669 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 HAUS4Q9H6D7 363 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 WDCPQ9H6R7 721 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
NEDD4-210ENST00000513957 RBM12Q9NTZ6 932 aaKnown RBP8.48□□□□□ -1.05
NEDD4-210ENST00000513957 ZSCAN32Q9NX65 697 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 ARHGEF38Q9NXL2 777 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 MMP17Q9ULZ9 603 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 SCINQ9Y6U3 715 aa8.48□□□□□ -1.05
NEDD4-210ENST00000513957 A0A1B0GVM2 712 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 SSU72P8A0A1W2PR75 194 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 TCRBV5S1A1TA0A578 114 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 TCAF2A6NFQ2 919 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 C2CD4BA6NLJ0 364 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 GOLGA8SH3BPF8 625 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 RTN2O75298 545 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 GRAP2O75791 330 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 ALDH1A2O94788 518 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 CISD3P0C7P0 127 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 HNRNPLP14866 589 aaKnown RBP eCLIP8.47□□□□□ -1.05
NEDD4-210ENST00000513957 PLA2G5P39877 138 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 KIR2DL1P43626 348 aaPredicted RBP8.47□□□□□ -1.05
NEDD4-210ENST00000513957 DGKEP52429 567 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 NRG1Q02297 640 aaPredicted RBP8.47□□□□□ -1.05
NEDD4-210ENST00000513957 KDSRQ06136 332 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 NME3Q13232 169 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 DMC1Q14565 340 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 ARL13BQ3SXY8 428 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 C5orf22Q49AR2 442 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 ZC3H12AQ5D1E8 599 aaKnown RBP8.47□□□□□ -1.05
NEDD4-210ENST00000513957 C10orf76Q5T2E6 689 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 HGSNATQ68CP4 663 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 SDE2Q6IQ49 451 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 DNAJC24Q6P3W2 148 aa8.47□□□□□ -1.05
NEDD4-210ENST00000513957 KIAA0907Q7Z7F0 614 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms