RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 CASP10Q92851 521 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SERAC1Q96JX3 654 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RNF157Q96PX1 679 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SLC4A5Q9BY07 1137 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ATXN3LQ9H3M9 355 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ZNRF3Q9ULT6 936 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 BARX2Q9UMQ3 279 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 PCDHA11Q9Y5I1 949 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 NFAT5O94916 1531 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 A0A087WXM4 84 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 LINC00854A0A1B0GVQ3 168 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 HBP1O60381 514 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RHOBTB1O94844 696 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 VAPBO95292 243 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ITGADQ13349 1161 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 KRT72Q14CN4 511 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SLC15A2Q16348 729 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 MON1BQ7L1V2 547 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 DCUN1D1Q96GG9 259 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 DNAJC1Q96KC8 554 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 WDR55Q9H6Y2 383 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 COG4Q9H9E3 785 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RNF19AQ9NV58 838 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SCN3BQ9NY72 215 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 PRKAG3Q9UGI9 489 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ZNF189O75820 626 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 GRIK1P39086 918 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 CCNFP41002 786 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 GRIA3P42263 894 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 AQP4P55087 323 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 CHRNB3Q05901 458 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 CYP51A1Q16850 503 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 CNPY1Q3B7I2 92 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 C6orf52Q5T4I8 152 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 EFHBQ8N7U6 833 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 EBNA1BP2Q99848 306 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SYT15Q9BQS2 421 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 GLIS2Q9BZE0 524 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 EXOSC4Q9NPD3 245 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 KIAA1257Q9ULG3 409 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 FMN2Q9NZ56 1722 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 TYW5A2RUC4 315 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RGSL1A5PLK6 1076 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ANXA9O76027 345 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 CD48P09326 243 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 PPARGP37231 505 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SZRD1Q7Z422 152 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 MICALL2Q8IY33 904 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 BLOC1S5Q8TDH9 187 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 TBCBQ99426 244 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 OMDQ99983 421 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 CDH22Q9UJ99 828 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RIMBP3CA6NJZ7 1639 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RIMBP3BA6NNM3 1639 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RIMBP3Q9UFD9 1639 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 A0A087WZ62 844 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 MAP3K13O43283 966 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 MAGEC1O60732 1142 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ITGA2BP08514 1039 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 MMP8P22894 467 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 HADHBP55084 474 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 UBE3AQ05086 875 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 TAF5Q15542 800 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SPANXN3Q5MJ09 141 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ANGEL2Q5VTE6 544 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 UNC5AQ6ZN44 842 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 MIER2Q8N344 545 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SPATA6LQ8N4H0 392 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 TUBGCP5Q96RT8 1024 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 KCTD14Q9BQ13 255 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 FDXACB1Q9BRP7 624 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 SNRNP25Q9BV90 132 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 UBE2OQ9C0C9 1292 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 ERAP1Q9NZ08 941 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 VTI1BQ9UEU0 232 aa7.93□□□□□ -1.14
CLCN3-209ENST00000513761 RSL24D1Q9UHA3 163 aaKnown RBP7.93□□□□□ -1.14
CLCN3-209ENST00000513761 LRPAP1P30533 357 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 NEK3P51956 506 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 BCAT1P54687 386 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 GDF10P55107 478 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 USP46P62068 366 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 FSTL1Q12841 308 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CDC16Q13042 620 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 MPP2Q14168 576 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 NIPA1Q7RTP0 329 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 SAMD7Q7Z3H4 446 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 DLG3Q92796 817 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 POMKQ9H5K3 350 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CYP3A43Q9HB55 503 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CACYBPQ9HB71 228 aaKnown RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 C6orf203Q9P0P8 240 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-209ENST00000513761 LACTBL1A8MY62 500 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 PTGES3LE9PB15 166 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CCDC159P0C7I6 412 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 CDKN2BP42772 138 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 GABRB2P47870 512 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 GRIA4P48058 902 aa7.92□□□□□ -1.14
CLCN3-209ENST00000513761 FAM183BPQ6ZVS7 135 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms