RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 INVSQ9Y283 1065 aa18.38■□□□□ 0.53
DDR1-272ENST00000513243 RAD54BQ9Y620 910 aa18.38■□□□□ 0.53
DDR1-272ENST00000513243 STON1Q9Y6Q2 735 aa18.38■□□□□ 0.53
DDR1-272ENST00000513243 EP300Q09472 2414 aaPredicted RBP18.38■□□□□ 0.53
DDR1-272ENST00000513243 DMDP11532 3685 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 EML5Q05BV3 1969 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 PABPC1P11940 636 aaKnown RBP18.37■□□□□ 0.53
DDR1-272ENST00000513243 CD70P32970 193 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 SULT1E1P49888 294 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 FANCCQ00597 558 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 PTP4A2Q12974 167 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 ENPP2Q13822 863 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 CLEC16AQ2KHT3 1053 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 SLC25A52Q3SY17 297 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 USP39Q53GS9 565 aaKnown RBP18.37■□□□□ 0.53
DDR1-272ENST00000513243 CHST9Q7L1S5 443 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 MFN1Q8IWA4 741 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 OLIG1Q8TAK6 271 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 FIBINQ8TAL6 211 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 PGAP3Q96FM1 320 aaPredicted RBP18.37■□□□□ 0.53
DDR1-272ENST00000513243 TBCBQ99426 244 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 C11orf70Q9BRQ4 267 aa18.37■□□□□ 0.53
DDR1-272ENST00000513243 TYW5A2RUC4 315 aaKnown RBP18.36■□□□□ 0.53
DDR1-272ENST00000513243 LRRC53A6NM62 1247 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 GOLGA6L19H0YKK7 550 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 NPC1O15118 1278 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 CCDC172P0C7W6 258 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 GABRG2P18507 467 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 IL12RB1P42701 662 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 NSFP46459 744 aaKnown RBP18.36■□□□□ 0.53
DDR1-272ENST00000513243 CXCR3P49682 368 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 CENPCQ03188 943 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 ZNF234Q14588 700 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 ARCQ7LC44 396 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.36■□□□□ 0.53
DDR1-272ENST00000513243 AHI1Q8N157 1196 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 PGBD3Q8N328 593 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 CARNMT1Q8N4J0 409 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 WFIKKN2Q8TEU8 576 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 ZC3H10Q96K80 434 aaKnown RBP18.36■□□□□ 0.53
DDR1-272ENST00000513243 SYT11Q9BT88 431 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 TTYH3Q9C0H2 523 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 ANLNQ9NQW6 1124 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 METTL5Q9NRN9 209 aaKnown RBP18.36■□□□□ 0.53
DDR1-272ENST00000513243 SEPT11Q9NVA2 429 aaKnown RBP18.36■□□□□ 0.53
DDR1-272ENST00000513243 BCCIPQ9P287 314 aaKnown RBP eCLIP18.36■□□□□ 0.53
DDR1-272ENST00000513243 GMEB2Q9UKD1 530 aa18.36■□□□□ 0.53
DDR1-272ENST00000513243 F5H5T6 163 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 I6L893 689 aaPredicted RBP18.35■□□□□ 0.53
DDR1-272ENST00000513243 PAGE1O75459 146 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 LUC7L3O95232 432 aaKnown RBP18.35■□□□□ 0.53
DDR1-272ENST00000513243 ADCY5O95622 1261 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 F9P00740 461 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 RETP07949 1114 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 DEUP1Q05D60 604 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 LMAN2Q12907 356 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 AUHQ13825 339 aaKnown RBP18.35■□□□□ 0.53
DDR1-272ENST00000513243 PLK5Q496M5 336 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 FSCBQ5H9T9 825 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 MBLAC2Q68D91 279 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 FBXL22Q6P050 247 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 BNIPLQ7Z465 357 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 PHF13Q86YI8 300 aaPredicted RBP18.35■□□□□ 0.53
DDR1-272ENST00000513243 EMC1Q8N766 993 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 ZNF557Q8N988 423 aaPredicted RBP18.35■□□□□ 0.53
DDR1-272ENST00000513243 CYB5D2Q8WUJ1 264 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 RLN3Q8WXF3 142 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 CFAP57Q96MR6 1250 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 WDCPQ9H6R7 721 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 ADAM22Q9P0K1 906 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 HS3ST4Q9Y661 456 aa18.35■□□□□ 0.53
DDR1-272ENST00000513243 GVINP1Q7Z2Y8 2422 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 GJB6O95452 261 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 TGM1P22735 817 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 PRKCHP24723 683 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 PBX1P40424 430 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 ATXN1P54253 815 aaKnown RBP18.34■□□□□ 0.53
DDR1-272ENST00000513243 UBASH3AP57075 661 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 MTA1Q13330 715 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 CDH18Q13634 790 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 E2F5Q15329 346 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 PTPRNQ16849 979 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 FUT11Q495W5 492 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 BRMS1LQ5PSV4 323 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
DDR1-272ENST00000513243 SND1Q7KZF4 910 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDR1-272ENST00000513243 KIAA2013Q8IYS2 634 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 FRMD1Q8N878 549 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 IGSF8Q969P0 613 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 EDEM3Q9BZQ6 932 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 TKTL2Q9H0I9 626 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 DUSP15Q9H1R2 295 aaPredicted RBP18.34■□□□□ 0.53
DDR1-272ENST00000513243 ARHGEF38Q9NXL2 777 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 AIPL1Q9NZN9 384 aa18.34■□□□□ 0.53
DDR1-272ENST00000513243 INTS6Q9UL03 887 aaKnown RBP18.34■□□□□ 0.53
DDR1-272ENST00000513243 H0Y626 953 aa18.33■□□□□ 0.52
DDR1-272ENST00000513243 POLR2EP19388 210 aaKnown RBP18.33■□□□□ 0.52
DDR1-272ENST00000513243 NDUFV2P19404 249 aa18.33■□□□□ 0.52
DDR1-272ENST00000513243 BCKDHBP21953 392 aa18.33■□□□□ 0.52
DDR1-272ENST00000513243 GGCXP38435 758 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms