RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 MAP3K13O43283 966 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 CHRNB2P17787 502 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 TACR2P21452 398 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
RNF4-215ENST00000511843 SOX5P35711 763 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 PTGER3P43115 390 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 NOMO3P69849 1222 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 LMNB2Q03252 620 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 ARID5AQ03989 594 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 LMAN2Q12907 356 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 EIF4EBP2Q13542 120 aaPredicted RBP13.77□□□□□ -0.21
RNF4-215ENST00000511843 FNDC3BQ53EP0 1204 aaKnown RBP13.77□□□□□ -0.21
RNF4-215ENST00000511843 FSCBQ5H9T9 825 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 FAM102AQ5T9C2 384 aaPredicted RBP13.77□□□□□ -0.21
RNF4-215ENST00000511843 RNF43Q68DV7 783 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 SERPINA13PQ6UXR4 307 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 PHLDB2Q86SQ0 1253 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 ERICH1Q86X53 443 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 XYLT1Q86Y38 959 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 MFN1Q8IWA4 741 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 DOCK4Q8N1I0 1966 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
RNF4-215ENST00000511843 ANKRD20A12PQ8NF67 263 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 NEK11Q8NG66 645 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 UCMAQ8WVF2 138 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 RNF34Q969K3 372 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 AZIN2Q96A70 460 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 LOXL4Q96JB6 756 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 SPACA7Q96KW9 195 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 SPAG5Q96R06 1193 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 CYP8B1Q9UNU6 501 aa13.77□□□□□ -0.21
RNF4-215ENST00000511843 ATXN2Q99700 1313 aaKnown RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 BCLAF3A2AJT9 711 aaKnown RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 PATE3B3GLJ2 98 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 M0QYT0 321 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 TEX33O43247 280 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 LRP3O75074 770 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 EPHX1P07099 455 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 GLI1P08151 1106 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 IRAK1P51617 712 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 FMO1Q01740 532 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 CENPCQ03188 943 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 ENPP2Q13822 863 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 EIF4HQ15056 248 aaKnown RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 PLA2G2CQ5R387 149 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 MPP7Q5T2T1 576 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 MBLAC2Q68D91 279 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 TRNP1Q6NT89 227 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 KIAA0907Q7Z7F0 614 aaPredicted RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 AHI1Q8N157 1196 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.76□□□□□ -0.21
RNF4-215ENST00000511843 ATP6V0D2Q8N8Y2 350 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 SLC30A5Q8TAD4 765 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 LMLNQ96KR4 655 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 BTN2A3PQ96KV6 586 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 DDX50Q9BQ39 737 aaKnown RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 MKRN2Q9H000 416 aaKnown RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 MTG2Q9H4K7 406 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 PIGVQ9NUD9 493 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 CDV3Q9UKY7 258 aaKnown RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 INTS6Q9UL03 887 aaKnown RBP13.76□□□□□ -0.21
RNF4-215ENST00000511843 SNX10Q9Y5X0 201 aa13.76□□□□□ -0.21
RNF4-215ENST00000511843 IGHV1OR15-9A0A0B4J2B8 117 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 SYCE3A1L190 88 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 LRRC10BA6NIK2 292 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 GJB6O95452 261 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 ZNF806P0C7X5 589 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 NOS2P35228 1153 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 FLT3P36888 993 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 STAT1P42224 750 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 MATKP42679 507 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 CTSOP43234 321 aaPredicted RBP13.75□□□□□ -0.21
RNF4-215ENST00000511843 GABRB2P47870 512 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 SULT1E1P49888 294 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 ATXN1P54253 815 aaKnown RBP13.75□□□□□ -0.21
RNF4-215ENST00000511843 CDR2Q01850 454 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 RPL6Q02878 288 aaKnown RBP13.75□□□□□ -0.21
RNF4-215ENST00000511843 CDH18Q13634 790 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 STARD3Q14849 445 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 PTPRNQ16849 979 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 AASDHQ4L235 1098 aaPredicted RBP13.75□□□□□ -0.21
RNF4-215ENST00000511843 SMYD5Q6GMV2 418 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 LPCAT2Q7L5N7 544 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 CYP2U1Q7Z449 544 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 C12orf50Q8NA57 414 aaPredicted RBP13.75□□□□□ -0.21
RNF4-215ENST00000511843 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
RNF4-215ENST00000511843 FIBINQ8TAL6 211 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 WFIKKN2Q8TEU8 576 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 PIGKQ92643 395 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 ERGIC2Q96RQ1 377 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 TBCBQ99426 244 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 NPY6RQ99463 290 aa13.75□□□□□ -0.21
RNF4-215ENST00000511843 PRMT1Q99873 361 aaKnown RBP13.75□□□□□ -0.21
RNF4-215ENST00000511843 FUCA2Q9BTY2 467 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 251.8 ms