RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 FTLP02792 175 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-208ENST00000511604 ACAT1P24752 427 aaKnown RBP7.51□□□□□ -1.21
CPNE4-208ENST00000511604 RFC4P35249 363 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 POLD2P49005 469 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 CENPCQ03188 943 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 PDIA2Q13087 525 aaKnown RBP7.51□□□□□ -1.21
CPNE4-208ENST00000511604 VPS72Q15906 364 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 LDLRAP1Q5SW96 308 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 SHEQ5VZ18 495 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 DENND5BQ6ZUT9 1274 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 HAUS6Q7Z4H7 955 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 FAM109AQ8N4B1 249 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 CD101Q93033 1021 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 SLC35C1Q96A29 364 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 TTC17Q96AE7 1141 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 ALKBH8Q96BT7 664 aaKnown RBP7.51□□□□□ -1.21
CPNE4-208ENST00000511604 SNX18Q96RF0 628 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 KCNK16Q96T55 309 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 PKP2Q99959 881 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 MTMR12Q9C0I1 747 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 WDR12Q9GZL7 423 aaKnown RBP7.51□□□□□ -1.21
CPNE4-208ENST00000511604 PPCSQ9HAB8 311 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 SAYSD1Q9NPB0 183 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 PARVAQ9NVD7 372 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 BARHL2Q9NY43 387 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 ITGA11Q9UKX5 1188 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.51□□□□□ -1.21
CPNE4-208ENST00000511604 AP3M1Q9Y2T2 418 aa7.51□□□□□ -1.21
CPNE4-208ENST00000511604 A0A0B4J203 849 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 EVPLLA8MZ36 301 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ATP6V1G2-DDX39BF2Z307 99 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 H0YJX3 145 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 INO80B-WBP1J3KQ70 363 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 RNF103O00237 685 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 VWA5AO00534 786 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 KLF11O14901 512 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 SHOXO15266 292 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 NADKO95544 446 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 GH2P01242 217 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 UQCRFS1P1P0C7P4 283 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 KITP10721 976 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 PTPN1P18031 435 aaKnown RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ITGAXP20702 1163 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ETV4P43268 484 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 PSMC6P62333 389 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 IKQ13123 557 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 IRF5Q13568 498 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 SNX17Q15036 470 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 DUSP7Q16829 419 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CLEC16AQ2KHT3 1053 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CBWD6Q4V339 395 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CBWD3Q5JTY5 395 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CBWD5Q5RIA9 395 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ATG16L1Q676U5 607 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 METTL2BQ6P1Q9 378 aaKnown RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 FIP1L1Q6UN15 594 aaKnown RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 UTS2BQ765I0 119 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ANKRD53Q8N9V6 530 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 SIMC1Q8NDZ2 872 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ABHD11Q8NFV4 315 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 TM9SF2Q99805 663 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 IER2Q9BTL4 223 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ACAT2Q9BWD1 397 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 STN1Q9H668 368 aaKnown RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 VPS37BQ9H9H4 285 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CPNE5Q9HCH3 593 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 MARCOQ9UEW3 520 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ZNF229Q9UJW7 825 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 STRIP2Q9ULQ0 834 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 JAG2Q9Y219 1238 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 POTEB3A0JP26 581 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 SDR42E2A6NKP2 422 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 H0YIN7 160 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 I3L4J1 428 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 SLC9A3R1O14745 358 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 MAN1A2O60476 641 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 KRT8P05787 483 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 DBTP11182 482 aaKnown RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 MAN1A1P33908 653 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 SOX5P35711 763 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 OR3A3P47888 321 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 TNNI2P48788 182 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 HADHBP55084 474 aaKnown RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CTSWP56202 376 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ALCAMQ13740 583 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CDK10Q15131 360 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 DLG2Q15700 870 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CALCRLQ16602 461 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 C2CD6Q53TS8 623 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 ESCO1Q5FWF5 840 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CLVS2Q5SYC1 327 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 RSBN1Q5VWQ0 802 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 IZUMO3Q5VZ72 239 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 POTEBQ6S5H4 581 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 BNC2Q6ZN30 1099 aaPredicted RBP7.5□□□□□ -1.21
CPNE4-208ENST00000511604 KRT28Q7Z3Y7 464 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 NEK8Q86SG6 692 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 SLC22A16Q86VW1 577 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 IFNL1Q8IU54 200 aa7.5□□□□□ -1.21
CPNE4-208ENST00000511604 CADM2Q8N3J6 435 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms