RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 MAML3Q96JK9 1138 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 SPATA13Q96N96 652 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 FAM210AQ96ND0 272 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 SORT1Q99523 831 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 MPHOSPH6Q99547 160 aaKnown RBP9.35□□□□□ -0.91
SNF8-210ENST00000511214 CPNE1Q99829 537 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 NT5C1AQ9BXI3 368 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 MRPS26Q9BYN8 205 aaKnown RBP9.35□□□□□ -0.91
SNF8-210ENST00000511214 CDH19Q9H159 772 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 ZNF395Q9H8N7 513 aaPredicted RBP9.35□□□□□ -0.91
SNF8-210ENST00000511214 PICK1Q9NRD5 415 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 STK39Q9UEW8 545 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 CIDEBQ9UHD4 219 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 ADAMTS6Q9UKP5 1117 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 CNOT11Q9UKZ1 510 aaKnown RBP9.35□□□□□ -0.91
SNF8-210ENST00000511214 HEY1Q9Y5J3 304 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 COL4A5P29400 1685 aa9.35□□□□□ -0.91
SNF8-210ENST00000511214 ANK1P16157 1881 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 COL11A1P12107 1806 aaPredicted RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 GOLGA8QA0A0J9YX86 632 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 GOLGA8OA6NCC3 632 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 A6NJR5 290 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 MEI4A8MW99 385 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 GOLGA8NF8WBI6 632 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 SLCO1B7G3V0H7 640 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 H3BNX3 289 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 TPP1O14773 563 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 ITGB3P05106 788 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 PRKCGP05129 697 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 PFKMP08237 780 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 SRGAP2CP0DJJ0 459 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 CXCL8P10145 99 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 CPA3P15088 417 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 RAG1P15918 1043 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 GLDCP23378 1020 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 SPRP35270 261 aaPredicted RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 TCF7P36402 384 aaPredicted RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 ALDH1A3P47895 512 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 SERPINB8P50452 374 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 CDH8P55286 799 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 MBTD1Q05BQ5 628 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 KLF10Q13118 480 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 DGKZQ13574 1117 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 RFTN1Q14699 578 aaPredicted RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 TRIP10Q15642 601 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 C15orf59Q2T9L4 293 aaPredicted RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 PABPC1LQ4VXU2 614 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 SH3D19Q5HYK7 790 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 RARS2Q5T160 578 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 ARHGAP17Q68EM7 881 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 RNF111Q6ZNA4 994 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 ZCCHC23Q6ZST2 131 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 DENND5BQ6ZUT9 1274 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 DEFB107AQ8IZN7 70 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 CPSF7Q8N684 471 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 B4GALNT2Q8NHY0 566 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 RP9Q8TA86 221 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 SLC7A14Q8TBB6 771 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 TFB1MQ8WVM0 346 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 HTR3CQ8WXA8 447 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 PYDC1Q8WXC3 89 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 HPDLQ96IR7 371 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 PRICKLE1Q96MT3 831 aaPredicted RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 EPAS1Q99814 870 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 C11orf84Q9BUA3 381 aaPredicted RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 DNAI2Q9GZS0 605 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 ZNF696Q9H7X3 374 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 NGRNQ9NPE2 291 aaKnown RBP9.34□□□□□ -0.91
SNF8-210ENST00000511214 TXNDC16Q9P2K2 825 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 TSPAN16Q9UKR8 245 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 PHF24Q9UPV7 400 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 RAD54BQ9Y620 910 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 LCTP09848 1927 aa9.34□□□□□ -0.91
SNF8-210ENST00000511214 BRWD3Q6RI45 1802 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 C15orf38-AP3S2A0A0A6YYH1 394 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 ARHGAP10A1A4S6 786 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 WDR27A2RRH5 827 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 RGSL1A5PLK6 1076 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 LACTBL1A8MY62 500 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 HBP1O60381 514 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 LYPLA1O75608 230 aaPredicted RBP9.33□□□□□ -0.92
SNF8-210ENST00000511214 TMCC1O94876 653 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 TNFAIP8O95379 198 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 POLBP06746 335 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 NFICP08651 508 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 STAG3L1P0CL83 205 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 CYP3A5P20815 502 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 PEX2P28328 305 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 SERPINB6P35237 376 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 PHKA2P46019 1235 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 RPL34P49207 117 aaKnown RBP9.33□□□□□ -0.92
SNF8-210ENST00000511214 GLUD2P49448 558 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 NDST1P52848 882 aa9.33□□□□□ -0.92
SNF8-210ENST00000511214 HIRAP54198 1017 aaPredicted RBP9.33□□□□□ -0.92
SNF8-210ENST00000511214 EPHB1P54762 984 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms