RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 GPD1P21695 349 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 HOXA6P31267 233 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 CYLC1P35663 651 aaPredicted RBP16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 KIR2DL1P43626 348 aaPredicted RBP16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 NRLP54845 237 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 NME3Q13232 169 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 EIF4EBP2Q13542 120 aaPredicted RBP16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 C15orf59Q2T9L4 293 aaPredicted RBP16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 SLC25A52Q3SY17 297 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 CCDC14Q49A88 953 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 RAB6CQ53S08 254 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 DCUN1D2Q6PH85 259 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 H2AFVQ71UI9 128 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 SYT13Q7L8C5 426 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 LONP2Q86WA8 852 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 ANP32BQ92688 251 aaKnown RBP16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 NT5C3BQ969T7 300 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 EXOC4Q96A65 974 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 SLC39A13Q96H72 371 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 BBS2Q9BXC9 721 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 RAB6CQ9H0N0 254 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 MARK1Q9P0L2 795 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 SLC8A2Q9UPR5 921 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 TLR6Q9Y2C9 796 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 EPN1Q9Y6I3 576 aaPredicted RBP16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 SCINQ9Y6U3 715 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 CFAP54Q96N23 3096 aa16.13■□□□□ 0.17
SH3TC1-220ENST00000511002 EIF3CLB5ME19 914 aaKnown RBP16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 CCP110O43303 1012 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 CACNG3O60359 315 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 ATG13O75143 517 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 TMEM253P0C7T8 217 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 TYRP14679 529 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 SDC4P31431 198 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 TIE1P35590 1138 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 PTPN9P43378 593 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 ATXN1P54253 815 aaKnown RBP16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 ATP11AP98196 1134 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 ZNF252P-AS1Q0IIN9 211 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 NNTQ13423 1086 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 CDO1Q16878 200 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 ZC3H12AQ5D1E8 599 aaKnown RBP16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 TMEM92Q6UXU6 159 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 BNIPLQ7Z465 357 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 WDR5BQ86VZ2 330 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 DENND1CQ8IV53 801 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 ALLCQ8N6M5 410 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 IL17RCQ8NAC3 791 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 CTNNBL1Q8WYA6 563 aaPredicted RBP16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 PDLIM2Q96JY6 352 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 EIF3CQ99613 913 aaKnown RBP16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 NUP85Q9BW27 656 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 PIGVQ9NUD9 493 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 DNAJC17Q9NVM6 304 aaKnown RBP16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 RRN3Q9NYV6 651 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 TFR2Q9UP52 801 aa16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 REXO2Q9Y3B8 237 aaKnown RBP16.12■□□□□ 0.17
SH3TC1-220ENST00000511002 SPAG17Q6Q759 2223 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 A0A0A0MRY4 1105 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 TMEM191CA6NGB0 347 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 SGK1O00141 431 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 KLF8O95600 359 aaPredicted RBP16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 GBP1P32455 592 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 GRIA2P42262 883 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 MAGEA1P43355 309 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 ZNF143P52747 638 aaPredicted RBP16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 DEUP1Q05D60 604 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 RING1Q06587 406 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 PRR23BQ6ZRT6 265 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 TERB1Q8NA31 727 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 TXNDC5Q8NBS9 432 aaKnown RBP16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 ACRBPQ8NEB7 543 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 ACDQ96AP0 544 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 PGAP3Q96FM1 320 aaPredicted RBP16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 MRPL47Q9HD33 250 aaKnown RBP16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 DEC1Q9P2X7 70 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 CLEC4EQ9ULY5 219 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 PCDHA13Q9Y5I0 950 aa16.11■□□□□ 0.17
SH3TC1-220ENST00000511002 TBC1D3BA6NDS4 549 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 PRRT4C9JH25 899 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 ADAM23O75077 832 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 MOCS2O96007 188 aaPredicted RBP16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 PENKP01210 267 aaPredicted RBP16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 CISD3P0C7P0 127 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 RDXP35241 583 aaKnown RBP16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 HARS2P49590 506 aaKnown RBP16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 MRPS21P82921 87 aaKnown RBP16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 SIM2Q14190 667 aaPredicted RBP16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 SPA17Q15506 151 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 C10orf76Q5T2E6 689 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 FYB2Q5VWT5 728 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 EGFLAMQ63HQ2 1017 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 NUGGCQ68CJ6 796 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 GRAMD4Q6IC98 578 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 LRRC8AQ8IWT6 810 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
SH3TC1-220ENST00000511002 RUBCNQ92622 972 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms