RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CAMK4Q16566 473 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 GOLGA7BQ2TAP0 167 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 ELOA3BQ3SY89 546 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 C2orf27AQ580R0 203 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 C10orf120Q5SQS8 335 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 SLCO4C1Q6ZQN7 724 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 CCDC186Q7Z3E2 898 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 VN1R5Q7Z5H4 357 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 PIGZQ86VD9 579 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 WDR5BQ86VZ2 330 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 TMEM25Q86YD3 366 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 UBR7Q8N806 425 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 ANKRD52Q8NB46 1076 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 PHC3Q8NDX5 983 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 ELOA3Q8NG57 546 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 USP33Q8TEY7 942 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 KAT5Q92993 513 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 CLEC4MQ9H2X3 399 aaPredicted RBP9.03□□□□□ -0.96
PDPN-209ENST00000510906 FAM124BQ9H5Z6 455 aaPredicted RBP9.03□□□□□ -0.96
PDPN-209ENST00000510906 PARD6AQ9NPB6 346 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
PDPN-209ENST00000510906 TSPAN16Q9UKR8 245 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 RAB23Q9ULC3 237 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 SPEGQ15772 3267 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 ZZEF1O43149 2961 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 ZFYVE26Q68DK2 2539 aa9.02□□□□□ -0.96
PDPN-209ENST00000510906 BICDL2A1A5D9 508 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 O00370 1275 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 PMM2O15305 246 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 HOXC11O43248 304 aaPredicted RBP9.02□□□□□ -0.97
PDPN-209ENST00000510906 KAT7O95251 611 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 B3GALT4O96024 378 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 CALCAP01258 141 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 TGM1P22735 817 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 TBXAS1P24557 533 aaPredicted RBP9.02□□□□□ -0.97
PDPN-209ENST00000510906 CNR2P34972 360 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 ID4P47928 161 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 LIG3P49916 1009 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 YWHAEP62258 255 aaKnown RBP9.02□□□□□ -0.97
PDPN-209ENST00000510906 GAD2Q05329 585 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 SGO2Q562F6 1265 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 RAB41Q5JT25 222 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 RNFT1Q5M7Z0 435 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 LAIR1Q6GTX8 287 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 FOXR2Q6PJQ5 311 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 HTR3DQ70Z44 454 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 CEP68Q76N32 757 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 SYT13Q7L8C5 426 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 MIB1Q86YT6 1006 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 ARHGEF19Q8IW93 802 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 TRIM59Q8IWR1 403 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 PPM1KQ8N3J5 372 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 NAT16Q8N8M0 369 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 LMO3Q8TAP4 145 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 UBA3Q8TBC4 463 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 NDRG1Q92597 394 aaKnown RBP9.02□□□□□ -0.97
PDPN-209ENST00000510906 SECISBP2LQ93073 1101 aaKnown RBP9.02□□□□□ -0.97
PDPN-209ENST00000510906 ACDQ96AP0 544 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 RMDN1Q96DB5 314 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 OTUB2Q96DC9 234 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 NT5C1BQ96P26 610 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 MED15Q96RN5 788 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 PNKPQ96T60 521 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 SRRTQ9BXP5 876 aaKnown RBP9.02□□□□□ -0.97
PDPN-209ENST00000510906 ARHGEF4Q9NR80 690 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 SPHK2Q9NRA0 654 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 ADAMTS1Q9UHI8 967 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 GMEB2Q9UKD1 530 aa9.02□□□□□ -0.97
PDPN-209ENST00000510906 ZNF638Q14966 1978 aaKnown RBP9.02□□□□□ -0.97
PDPN-209ENST00000510906 CCDC163A0A0D9SF12 145 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 XPO1O14980 1071 aaKnown RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 TRIM24O15164 1050 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 P4HA2O15460 535 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 TULP3O75386 442 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 RPP40O75818 363 aaKnown RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 APBB3O95704 486 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 APODP05090 189 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 RALAP11233 206 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 VDRP11473 427 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 HNRNPLP14866 589 aaKnown RBP eCLIP9.01□□□□□ -0.97
PDPN-209ENST00000510906 EIF2DP41214 584 aaKnown RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 TKTL1P51854 596 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 RPS26P62854 115 aaKnown RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 ANO4Q32M45 955 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 EMC10Q5UCC4 262 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 KLHDC10Q6PID8 442 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 TMEM270Q6UE05 265 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.01□□□□□ -0.97
PDPN-209ENST00000510906 RELL1Q8IUW5 271 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 CCDC33Q8N5R6 958 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 CAMKK1Q8N5S9 505 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 ALLCQ8N6M5 410 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 GOLGA6L1Q8N7Z2 621 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 TRIML1Q8N9V2 468 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 GAB3Q8WWW8 586 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 TFAP2BQ92481 460 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 ZSWIM1Q9BR11 485 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 ULBP1Q9BZM6 244 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 UBXN6Q9BZV1 441 aa9.01□□□□□ -0.97
PDPN-209ENST00000510906 ZDHHC4Q9NPG8 344 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms