RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 HJURPQ8NCD3 748 aaPredicted RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 ADAM32Q8TC27 787 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 WFDC5Q8TCV5 224 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 DQX1Q8TE96 717 aaKnown RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 SERPINB11Q96P15 392 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 ADAM33Q9BZ11 813 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 IRX2Q9BZI1 471 aaPredicted RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 TMEM245Q9H330 911 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 EIF2B4Q9UI10 523 aaKnown RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 NFE2L3Q9Y4A8 694 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 PI4KAP42356 2102 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 ASCC3Q8N3C0 2202 aaKnown RBP15.97■□□□□ 0.15
TPM3-219ENST00000509409 THAP12O43422 761 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 HYAL3O43820 417 aaPredicted RBP15.97■□□□□ 0.15
TPM3-219ENST00000509409 IGLV3-19P01714 112 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 MARSP56192 900 aaKnown RBP15.97■□□□□ 0.15
TPM3-219ENST00000509409 PTPRNQ16849 979 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 NADSYN1Q6IA69 706 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 FIBINQ8TAL6 211 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 GANCQ8TET4 914 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 FCRL2Q96LA5 508 aaPredicted RBP15.97■□□□□ 0.15
TPM3-219ENST00000509409 CAMK1GQ96NX5 476 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 MED15Q96RN5 788 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 CRACR2AQ9BSW2 395 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 BTBD1Q9H0C5 482 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 FBRSQ9HAH7 460 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 PRSS16Q9NQE7 514 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 WASF3Q9UPY6 502 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 TLR6Q9Y2C9 796 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 PLXND1Q9Y4D7 1925 aa15.97■□□□□ 0.15
TPM3-219ENST00000509409 H0Y626 953 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 TRIM16O95361 564 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 FYNP06241 537 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 GNA15P30679 374 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 RPS14P62263 151 aaKnown RBP15.96■□□□□ 0.15
TPM3-219ENST00000509409 RPS24P62847 133 aaKnown RBP15.96■□□□□ 0.15
TPM3-219ENST00000509409 FAM193AP78312 1265 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 TRIP6Q15654 476 aaKnown RBP15.96■□□□□ 0.15
TPM3-219ENST00000509409 CAMK4Q16566 473 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 ARHGAP44Q17R89 818 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 CFAP52Q8N1V2 620 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 ZNF606Q8WXB4 792 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 TRIM62Q9BVG3 475 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 NUCKS1Q9H1E3 243 aaKnown RBP15.96■□□□□ 0.15
TPM3-219ENST00000509409 C6orf106Q9H6K1 298 aaPredicted RBP15.96■□□□□ 0.15
TPM3-219ENST00000509409 GAREM1Q9H706 876 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 CNTN6Q9UQ52 1028 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 NCKAP1Q9Y2A7 1128 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 CEP83Q9Y592 693 aa15.96■□□□□ 0.15
TPM3-219ENST00000509409 MAP1BP46821 2468 aaKnown RBP15.95■□□□□ 0.14
TPM3-219ENST00000509409 RNASEH1O60930 286 aaKnown RBP15.95■□□□□ 0.14
TPM3-219ENST00000509409 FSBPO95073 299 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 MOCS3O95396 460 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 APOEP02649 317 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 ACSL1P33121 698 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 CSKP41240 450 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 MATKP42679 507 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 RPL34P49207 117 aaKnown RBP15.95■□□□□ 0.14
TPM3-219ENST00000509409 ZBTB16Q05516 673 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 CDH18Q13634 790 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 TTC31Q49AM3 519 aaPredicted RBP15.95■□□□□ 0.14
TPM3-219ENST00000509409 ZC3H12AQ5D1E8 599 aaKnown RBP15.95■□□□□ 0.14
TPM3-219ENST00000509409 MS4A13Q5J8X5 152 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 SYPL2Q5VXT5 272 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 ZNF776Q68DI1 518 aaPredicted RBP15.95■□□□□ 0.14
TPM3-219ENST00000509409 IL27RAQ6UWB1 636 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 ENOSF1Q7L5Y1 443 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 TAC4Q86UU9 113 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 NAXDQ8IW45 347 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 LGI2Q8N0V4 545 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 CHCHD4Q8N4Q1 142 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 SETD7Q8WTS6 366 aaKnown RBP15.95■□□□□ 0.14
TPM3-219ENST00000509409 STK32AQ8WU08 396 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 TTC17Q96AE7 1141 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 FAM81BQ96LP2 452 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 SLC4A5Q9BY07 1137 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 PCED1AQ9H1Q7 454 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 MTG2Q9H4K7 406 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 POPDC2Q9HBU9 364 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 KIAA1468Q9P260 1216 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 TJP2Q9UDY2 1190 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 SLC12A6Q9UHW9 1150 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 RWDD2AQ9UIY3 292 aa15.95■□□□□ 0.14
TPM3-219ENST00000509409 TNRC6BQ9UPQ9 1833 aaKnown RBP15.94■□□□□ 0.14
TPM3-219ENST00000509409 A0A1B0GVT2 93 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 E5RJQ4 531 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 GJB3O75712 270 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 SEMA4FO95754 770 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 CER1O95813 267 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 ASLP04424 464 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 SLC9A1P19634 815 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 CSNK1EP49674 416 aaKnown RBP15.94■□□□□ 0.14
TPM3-219ENST00000509409 YWHAZP63104 245 aaKnown RBP15.94■□□□□ 0.14
TPM3-219ENST00000509409 NNTQ13423 1086 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 TEAD4Q15561 434 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 TPD52L1Q16890 204 aaPredicted RBP15.94■□□□□ 0.14
TPM3-219ENST00000509409 ZNF423Q2M1K9 1284 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 HLA-BQ31612 363 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 DCAF6Q58WW2 860 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 RAP1GAP2Q684P5 730 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms