RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 GPATCH2LQ9NWQ4 482 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 MUTYHQ9UIF7 546 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 AMFRQ9UKV5 643 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 PYCARDQ9ULZ3 195 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 SNX10Q9Y5X0 201 aa15.33■□□□□ 0.04
RNF4-213ENST00000509388 NUP210Q8TEM1 1887 aaPredicted RBP15.33■□□□□ 0.04
RNF4-213ENST00000509388 DOCK8Q8NF50 2099 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 EYSQ5T1H1 3165 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 E9PAM4 449 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 ARNTLO00327 626 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 DAPK3O43293 454 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 RARAP10276 462 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 TYRP14679 529 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 TCF4P15884 667 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 IL1R2P27930 398 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 L1CAMP32004 1257 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 GJA4P35212 333 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 TAS2R40P59535 323 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 SLC25A11Q02978 314 aaKnown RBP15.32■□□□□ 0.04
RNF4-213ENST00000509388 SLC44A4Q53GD3 710 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 PPP6R3Q5H9R7 873 aaPredicted RBP15.32■□□□□ 0.04
RNF4-213ENST00000509388 LRRC38Q5VT99 294 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 TTC39BQ5VTQ0 682 aaPredicted RBP15.32■□□□□ 0.04
RNF4-213ENST00000509388 PEX26Q7Z412 305 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 C14orf80Q86SX3 495 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 MAP7D3Q8IWC1 876 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 CFAP52Q8N1V2 620 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 NAT16Q8N8M0 369 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 KCTD6Q8NC69 237 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 GOLPH3Q9H4A6 298 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 HEBP1Q9NRV9 189 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 PLK2Q9NYY3 685 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 MARK1Q9P0L2 795 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 PIAS3Q9Y6X2 628 aa15.32■□□□□ 0.04
RNF4-213ENST00000509388 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 GRID2IPA4D2P6 1211 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 H0Y626 953 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 I6L893 689 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 EEF2KO00418 725 aaKnown RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 HOXC11O43248 304 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 GLULP15104 373 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 ARL4AP40617 200 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 ZNF135P52742 658 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 CDH6P55285 790 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 TPI1P60174 286 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 RPS24P62847 133 aaKnown RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 NRG1Q02297 640 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 ZNF177Q13360 481 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 PREPLQ4J6C6 727 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 HS1BP3Q53T59 392 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 MPP7Q5T2T1 576 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 FYB2Q5VWT5 728 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 POLNQ7Z5Q5 900 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 CPNE8Q86YQ8 564 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 PYROXD2Q8N2H3 581 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 CARNMT1Q8N4J0 409 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 ZNF557Q8N988 423 aaPredicted RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 TBC1D31Q96DN5 1066 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 MSANTD3Q96H12 275 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 PRMT1Q99873 361 aaKnown RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 ZYG11BQ9C0D3 744 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 DDX56Q9NY93 547 aaKnown RBP15.31■□□□□ 0.04
RNF4-213ENST00000509388 WNT16Q9UBV4 365 aa15.31■□□□□ 0.04
RNF4-213ENST00000509388 OTOL1A6NHN0 477 aaPredicted RBP15.3■□□□□ 0.04
RNF4-213ENST00000509388 SPECC1L-ADORA2AF8WAN1 911 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 H3BRJ5 948 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 MAN2B1O00754 1011 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 PSTPIP1O43586 416 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 KIF5CO60282 957 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 CLDN11O75508 207 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 LRIG2O94898 1065 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 PENKP01210 267 aaPredicted RBP15.3■□□□□ 0.04
RNF4-213ENST00000509388 EPHB2P29323 1055 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 HTR7P34969 479 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 SOX9P48436 509 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 CDH18Q13634 790 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 PDK2Q15119 407 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 MLF2Q15773 248 aaPredicted RBP15.3■□□□□ 0.04
RNF4-213ENST00000509388 DPYSL2Q16555 572 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 CA9Q16790 459 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 TXNRD3NBQ6F5E7 133 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 C1orf228Q6PIY5 440 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 NUDT18Q6ZVK8 323 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 RALGPS2Q86X27 583 aaPredicted RBP15.3■□□□□ 0.04
RNF4-213ENST00000509388 MFN1Q8IWA4 741 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 REXO1L1PQ8IX06 675 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
RNF4-213ENST00000509388 LRRC57Q8N9N7 239 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 TRIM58Q8NG06 486 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 UBE2Q2Q8WVN8 375 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 IGSF8Q969P0 613 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 SHDQ96IW2 340 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 PRICKLE1Q96MT3 831 aaPredicted RBP15.3■□□□□ 0.04
RNF4-213ENST00000509388 MAGEB5Q9BZ81 275 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 CATSPERBQ9H7T0 1116 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 DONSONQ9NYP3 566 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 DEC1Q9P2X7 70 aa15.3■□□□□ 0.04
RNF4-213ENST00000509388 PPARGC1AQ9UBK2 798 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms