RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 RAB44Q7Z6P3 723 aaPredicted RBP11.35□□□□□ -0.59
RNF4-212ENST00000509258 TAC4Q86UU9 113 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 CACUL1Q86Y37 369 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 NAXDQ8IW45 347 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 CHCHD4Q8N4Q1 142 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 CADM4Q8NFZ8 388 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 DQX1Q8TE96 717 aaKnown RBP11.35□□□□□ -0.59
RNF4-212ENST00000509258 DDI1Q8WTU0 396 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 CYB5D2Q8WUJ1 264 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 ZNF606Q8WXB4 792 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 TOE1Q96GM8 510 aaKnown RBP11.35□□□□□ -0.59
RNF4-212ENST00000509258 LMLNQ96KR4 655 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 SLC4A5Q9BY07 1137 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 SLC2A11Q9BYW1 496 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 PRDM16Q9HAZ2 1276 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 ABCC13Q9NSE7 274 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 USP36Q9P275 1121 aaKnown RBP11.35□□□□□ -0.59
RNF4-212ENST00000509258 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 DSPP15924 2871 aaKnown RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 DMXL2Q8TDJ6 3036 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 A0A1B0GTW7 788 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 E5RJQ4 531 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 TIMM44O43615 452 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 SH3BP5O60239 455 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 LETM1O95202 739 aaPredicted RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 NCAM1P13591 858 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 PON1P27169 355 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 CD70P32970 193 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 HARS2P49590 506 aaKnown RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 COPAP53621 1224 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 TRIP6Q15654 476 aaKnown RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 PTPRNQ16849 979 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 MIIPQ5JXC2 388 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 ADGRF1Q5T601 910 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 KIAA0907Q7Z7F0 614 aaPredicted RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 ADIPOR2Q86V24 386 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 CREBRFQ8IUR6 639 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 PASD1Q8IV76 773 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 ZNF557Q8N988 423 aaPredicted RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 RNF139Q8WU17 664 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 DNASE2BQ8WZ79 361 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 IRGQQ8WZA9 623 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 PRCCQ92733 491 aaPredicted RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 SLC39A13Q96H72 371 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 HSFY1Q96LI6 401 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 GPR174Q9BXC1 333 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 MTG2Q9H4K7 406 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 ITM2CQ9NQX7 267 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 ELOVL2Q9NXB9 296 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 WSB2Q9NYS7 404 aaPredicted RBP11.34□□□□□ -0.59
RNF4-212ENST00000509258 SLCO1B1Q9Y6L6 691 aa11.34□□□□□ -0.59
RNF4-212ENST00000509258 THAP12O43422 761 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 CER1O95813 267 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 IGLV3-19P01714 112 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 MAOBP27338 520 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 GNA15P30679 374 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 NUMBP49757 651 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 TPMTP51580 245 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 TBX4P57082 545 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 RPS24P62847 133 aaKnown RBP11.33□□□□□ -0.6
RNF4-212ENST00000509258 KCNMA1Q12791 1236 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 MPPE1Q53F39 396 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 PIK3R6Q5UE93 754 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 MMS22LQ6ZRQ5 1243 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 PROSER1Q86XN7 944 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 TMPRSS6Q8IU80 811 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 ZCCHC9Q8N567 271 aaKnown RBP11.33□□□□□ -0.6
RNF4-212ENST00000509258 WFIKKN2Q8TEU8 576 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 ADAMTS14Q8WXS8 1223 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 SHC3Q92529 594 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 SIPA1Q96FS4 1042 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 MYO19Q96H55 970 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 CAMK1GQ96NX5 476 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 CPXM1Q96SM3 734 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 CIPCQ9C0C6 399 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 MIR1-1HGQ9H1L0 117 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 PLCB1Q9NQ66 1216 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 ST7Q9NRC1 585 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 ABCB8Q9NUT2 735 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 INTS6Q9UL03 887 aaKnown RBP11.33□□□□□ -0.6
RNF4-212ENST00000509258 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
RNF4-212ENST00000509258 FASNP49327 2511 aaKnown RBP11.32□□□□□ -0.6
RNF4-212ENST00000509258 ACSL4O60488 711 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 TBL1XO60907 577 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 LATS1O95835 1130 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 IGLV3-25P01717 112 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 FTH1P19P0C7X4 201 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 ZNF883P0CG24 379 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 CLCN1P35523 988 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 IRAK1P51617 712 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 RING1Q06587 406 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 CETN1Q12798 172 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 PDCLQ13371 301 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 EIF4EBP2Q13542 120 aaPredicted RBP11.32□□□□□ -0.6
RNF4-212ENST00000509258 STILQ15468 1287 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 FSCBQ5H9T9 825 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 OTUD1Q5VV17 481 aaPredicted RBP11.32□□□□□ -0.6
RNF4-212ENST00000509258 IL27RAQ6UWB1 636 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms