RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 OXTRP30559 389 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 GRIK2Q13002 908 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 DCAF12L1Q5VU92 463 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 SYPL2Q5VXT5 272 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 DENND1BQ6P3S1 775 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 TAC4Q86UU9 113 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 HDDC3Q8N4P3 179 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 ZCCHC9Q8N567 271 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 HJURPQ8NCD3 748 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 STK32AQ8WU08 396 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 FAM149B1Q96BN6 582 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 SLC39A13Q96H72 371 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 CRACR2AQ9BSW2 395 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 SLC4A5Q9BY07 1137 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 NUCKS1Q9H1E3 243 aaKnown RBP13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 SLC32A1Q9H598 525 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 UBE2TQ9NPD8 197 aaPredicted RBP13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 ST7Q9NRC1 585 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 KIAA1468Q9P260 1216 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 RWDD2AQ9UIY3 292 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 NAALADL1Q9UQQ1 740 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 TLR6Q9Y2C9 796 aa13.51□□□□□ -0.25
HMGCS1-205ENST00000508319 A0A1B0GTW7 788 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 BECN2A8MW95 431 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 E5RJQ4 531 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 SYPP08247 313 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 ACADMP11310 421 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 CD59P13987 128 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 GNSP15586 552 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 SPINK2P20155 84 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 GNA15P30679 374 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 ACADSBP45954 432 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 RPS24P62847 133 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 APBA1Q02410 837 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 BEND5Q7L4P6 421 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 ENOSF1Q7L5Y1 443 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 MFN1Q8IWA4 741 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 ZNF557Q8N988 423 aaPredicted RBP13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 FIBINQ8TAL6 211 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 ZNF606Q8WXB4 792 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 MYO19Q96H55 970 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 NUP58Q9BVL2 599 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 LHX5Q9H2C1 402 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 APEX2Q9UBZ4 518 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 XPO7Q9UIA9 1087 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 PLA2G4CQ9UP65 541 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 FREM2Q5SZK8 3169 aa13.5□□□□□ -0.25
HMGCS1-205ENST00000508319 SPAARA0A1B0GVQ0 90 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 METTL12A8MUP2 240 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 THAP12O43422 761 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 MED7O43513 233 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 FGFR1OPO95684 399 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 IGLV3-25P01717 112 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 ATP5BP06576 529 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 UBE2HP62256 183 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 FAM193AP78312 1265 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 SIM1P81133 766 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 PDCLQ13371 301 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 CAMK4Q16566 473 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 MS4A13Q5J8X5 152 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 TMEM110Q86TL2 294 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 FAM124AQ86V42 546 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 IRF2BP1Q8IU81 584 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 C1orf216Q8TAB5 229 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 TRIM62Q9BVG3 475 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 TMEM121BQ9BXQ6 578 aaPredicted RBP13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 FBRSQ9HAH7 460 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 PRSS16Q9NQE7 514 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 STIM2Q9P246 746 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 TJP2Q9UDY2 1190 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 INTS6Q9UL03 887 aaKnown RBP13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 PKD1L2Q7Z442 2459 aa13.49□□□□□ -0.25
HMGCS1-205ENST00000508319 CABIN1Q9Y6J0 2220 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 TYW5A2RUC4 315 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 C1QTNF9BB2RNN3 333 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 BCAT2O15382 392 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 MOCS2O96007 188 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 PROS1P07225 676 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 C1QTNF9P0C862 333 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 POLR2EP19388 210 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 SLC9A1P19634 815 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 ACSL1P33121 698 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 CSKP41240 450 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 RPS14P62263 151 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 CDH18Q13634 790 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 TAF5Q15542 800 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 ARHGAP44Q17R89 818 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 DCAF6Q58WW2 860 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 UNQ6494/PRO21346Q6UXR6 183 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 CARNMT1Q8N4J0 409 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 SHC3Q92529 594 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 TTC17Q96AE7 1141 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 FAM81BQ96LP2 452 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 DDX50Q9BQ39 737 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms