RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 PPM1KQ8N3J5 372 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 ZNF513Q8N8E2 541 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 MLKLQ8NB16 471 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 C1orf216Q8TAB5 229 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 UBA3Q8TBC4 463 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 KAT5Q92993 513 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 P2RY11Q96G91 374 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 FAM81BQ96LP2 452 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 KREMEN1Q96MU8 473 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 GABRG3Q99928 467 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 SLC2A11Q9BYW1 496 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 ABCC13Q9NSE7 274 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 RASAL2Q9UJF2 1139 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 AGO1Q9UL18 857 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 PCDHB4Q9Y5E5 795 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 CEP192Q8TEP8 1941 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 LAMA1P25391 3075 aa8.31□□□□□ -1.08
UBE2D3-222ENST00000508238 CKAP5Q14008 2032 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 A0A1W2PQF6 199 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 SLC12A8A0AV02 714 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 GTPBP10A4D1E9 387 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 TM4SF5O14894 197 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 TIMM44O43615 452 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 FBXO21O94952 628 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 IGLV3-27P01718 113 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 MPLP40238 635 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 GPD2P43304 727 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 HARS2P49590 506 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 MFAP3P55082 362 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 DAOAP59103 153 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 ENPP2Q13822 863 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 E2F5Q15329 346 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 ADGRF1Q5T601 910 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 SDE2Q6IQ49 451 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 MSANTD2Q6P1R3 559 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 TOGARAM2Q6ZUX3 1019 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 BEND5Q7L4P6 421 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 RRAGAQ7L523 313 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 IRF2BP1Q8IU81 584 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 DENND1CQ8IV53 801 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 ARHGEF19Q8IW93 802 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 RBBP8NLQ8NC74 664 aaPredicted RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 RNF139Q8WU17 664 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 DDX1Q92499 740 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 NDRG1Q92597 394 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 AZIN2Q96A70 460 aa8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 PIWIL1Q96J94 861 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 INTS2Q9H0H0 1204 aaKnown RBP8.3□□□□□ -1.08
UBE2D3-222ENST00000508238 TCRBV21S2A2A0A5A6 115 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 MED19A0JLT2 244 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 SART1O43290 800 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 ZNF217O75362 1048 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 CAVIN2O95810 425 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 CYBBP04839 570 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 HOXB2P14652 356 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 GABRG2P18507 467 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 BCKDHBP21953 392 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 BRD2P25440 801 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 ERCC5P28715 1186 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 GBP1P32455 592 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 DPP6P42658 865 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 RING1Q06587 406 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 EIF4HQ15056 248 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 SF3A2Q15428 464 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 CAMK4Q16566 473 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 MPPE1Q53F39 396 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 CT47A1Q5JQC4 288 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 MPP7Q5T2T1 576 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 EGFLAMQ63HQ2 1017 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 RNF43Q68DV7 783 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 TRIM65Q6PJ69 517 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 TMEM110Q86TL2 294 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 CHPFQ8IZ52 775 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 C12orf50Q8NA57 414 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 HMGB4Q8WW32 186 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 ZNF606Q8WXB4 792 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 EDEM1Q92611 657 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 SPACA7Q96KW9 195 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 ACOX2Q99424 681 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 TPSD1Q9BZJ3 242 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 CLSTN2Q9H4D0 955 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 UBE2TQ9NPD8 197 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 PLK2Q9NYY3 685 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 THAP10Q9P2Z0 257 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 MBD1Q9UIS9 605 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 IGF2RP11717 2491 aa8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 GOLGA4Q13439 2230 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-222ENST00000508238 ACACAQ13085 2346 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 DCDC2BA2VCK2 349 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 M0QYV0 167 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 IRAK2O43187 625 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 MED7O43513 233 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 LTFP02788 710 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 FYNP06241 537 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms