RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 PDE11AQ9HCR9 933 aa7.41□□□□□ -1.22
COL6A4P1-204ENST00000508169 COPG1Q9Y678 874 aaKnown RBP7.41□□□□□ -1.22
COL6A4P1-204ENST00000508169 TDRD9Q8NDG6 1382 aaKnown RBP7.41□□□□□ -1.22
COL6A4P1-204ENST00000508169 VPS8Q8N3P4 1428 aa7.41□□□□□ -1.22
COL6A4P1-204ENST00000508169 CYP3A7-CYP3A51PA0A087WV96 503 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 CCDC196A0A1B0GTZ2 297 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 TTC34A8MYJ7 566 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 B8ZZF3 427 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 ZNF213O14771 459 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 MT-CO3P00414 261 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 INSRRP14616 1297 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 CPA1P15085 419 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 CHN1P15882 459 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 CYP3A7P24462 503 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 PNPLA4P41247 253 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 RARRES1P49788 294 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 MFSD13AQ14CX5 517 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 CNGA3Q16281 694 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 ERCC6LQ2NKX8 1250 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 TSTD2Q5T7W7 516 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 CEP85Q6P2H3 762 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 KYAT3Q6YP21 454 aaKnown RBP7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 Q6ZPA2 131 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 ANKRD44Q8N8A2 993 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 HVCN1Q96D96 273 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 PRRX2Q99811 253 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 ZHX3Q9H4I2 956 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 GAR1Q9NY12 217 aaKnown RBP7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 ASIC5Q9NY37 505 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 MYRFQ9Y2G1 1151 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 FHAD1B1AJZ9 1412 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 ERCC6Q03468 1493 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 GRIN2BQ13224 1484 aa7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 THOC2Q8NI27 1593 aaKnown RBP7.4□□□□□ -1.22
COL6A4P1-204ENST00000508169 KRTAP9-6A0A140TA67 174 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 MGST3O14880 152 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 TNFAIP3P21580 790 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 AGTR2P50052 363 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 MAPRE1Q15691 268 aaKnown RBP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 TMED8Q6PL24 325 aaPredicted RBP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 KIAA1324Q6UXG2 1013 aaKnown RBP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 DCDC5Q6ZRR9 648 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 MAATS1Q7Z4T9 603 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 LAS2Q8IYD9 372 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 SRFBP1Q8NEF9 429 aaKnown RBP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 BBC3Q96PG8 261 aaPredicted RBP7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 NPAS1Q99742 590 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 HERC2P3Q9BVR0 1158 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 SEMA5BQ9P283 1151 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 ENTPD2Q9Y5L3 495 aa7.39□□□□□ -1.23
COL6A4P1-204ENST00000508169 SPATA31A1Q5TZJ5 1347 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 H3BNC9 293 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 GRM8O00222 908 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 CLIC1O00299 241 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 KLK10O43240 276 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 MBD4O95243 580 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 KAT7O95251 611 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 HNRNPCP07910 306 aaKnown RBP eCLIP7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 ACP5P13686 325 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 IGFBP2P18065 325 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 NDUFS1P28331 727 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 ELF1P32519 619 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 KRT9P35527 623 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 GEMIN4P57678 1058 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 MPP1Q00013 466 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 LMOD3Q0VAK6 560 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 GAB1Q13480 694 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 KCNB1Q14721 858 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 CBWD5Q5RIA9 395 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 ANO7Q6IWH7 933 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 TMEM88Q6PEY1 159 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 TMEM65Q6PI78 240 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 SLC39A5Q6ZMH5 540 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 TRIM72Q6ZMU5 477 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 RSRC2Q7L4I2 434 aaKnown RBP7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 SKA1Q96BD8 255 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 HTATIP2Q9BUP3 242 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 CLPBQ9H078 707 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 PRDM16Q9HAZ2 1276 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 PACSIN3Q9UKS6 424 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 AFG3L2Q9Y4W6 797 aa7.38□□□□□ -1.23
COL6A4P1-204ENST00000508169 MAP3K1Q13233 1512 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 HMGB1P1B2RPK0 211 aaPredicted RBP7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 H7C1Q1 480 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 RHOBTB3O94955 611 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 HNRNPA1P09651 372 aaKnown RBP eCLIP7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 KRT4P19013 534 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 STAT6P42226 847 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 KRTAP10-2P60368 255 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 HOXA4Q00056 320 aaPredicted RBP7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 THOC5Q13769 683 aaKnown RBP7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 PUM1Q14671 1186 aaKnown RBP eCLIP7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 PCYOX1LQ8NBM8 494 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 ADPRHL1Q8NDY3 354 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 STAMQ92783 540 aa7.37□□□□□ -1.23
COL6A4P1-204ENST00000508169 HIC2Q96JB3 615 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms