RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MESDQ14696 234 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 MLF2Q15773 248 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-210ENST00000506767 ANO4Q32M45 955 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 ERMARDQ5T6L9 678 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 MANEALQ5VSG8 457 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 FBXL22Q6P050 247 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 C14orf80Q86SX3 495 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 CHSY1Q86X52 802 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 CPNE8Q86YQ8 564 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 PSTKQ8IV42 348 aaKnown RBP13.28□□□□□ -0.28
TCOF1-210ENST00000506767 LGI2Q8N0V4 545 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 TPCN2Q8NHX9 752 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 IGSF8Q969P0 613 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 LRFN3Q9BTN0 628 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 BBS2Q9BXC9 721 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 SIK2Q9H0K1 926 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 ARHGEF3Q9NR81 526 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 SNX10Q9Y5X0 201 aa13.28□□□□□ -0.28
TCOF1-210ENST00000506767 KIAA1549LQ6ZVL6 1849 aa13.27□□□□□ -0.28
TCOF1-210ENST00000506767 NEDD8-MDP1E9PL57 170 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 F5H5T6 163 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 FAM72CH0Y354 149 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 BUB1O43683 1085 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 PRPSAP2O60256 369 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 CYBBP04839 570 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 HOXD9P28356 352 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-210ENST00000506767 L1CAMP32004 1257 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 GGCXP38435 758 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 EIF2DP41214 584 aaKnown RBP13.27□□□□□ -0.29
TCOF1-210ENST00000506767 SLC1A1P43005 524 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 RPS24P62847 133 aaKnown RBP13.27□□□□□ -0.29
TCOF1-210ENST00000506767 AMPD2Q01433 879 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 SEMA3BQ13214 749 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 BOLA3Q53S33 107 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 EFHC2Q5JST6 749 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 FAM72AQ5TYM5 149 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 TXNRD3NBQ6F5E7 133 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 FAM72DQ6L9T8 149 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 C1orf228Q6PIY5 440 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 TXNDC11Q6PKC3 985 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 C12orf40Q86WS4 652 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 FAM72BQ86X60 149 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 PYROXD2Q8N2H3 581 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 HJURPQ8NCD3 748 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-210ENST00000506767 DDI1Q8WTU0 396 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 TEKT4Q8WW24 435 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 SNRNP25Q9BV90 132 aaKnown RBP13.27□□□□□ -0.29
TCOF1-210ENST00000506767 PLK2Q9NYY3 685 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.29
TCOF1-210ENST00000506767 TRIM10Q9UDY6 481 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 VANGL2Q9ULK5 521 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 CA14Q9ULX7 337 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 AP4E1Q9UPM8 1137 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 NEU3Q9UQ49 428 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 ALG6Q9Y672 507 aa13.27□□□□□ -0.29
TCOF1-210ENST00000506767 A0A0A0MRY4 1105 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 TMEM110-MUSTN1A8MSY1 372 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 E9PAM4 449 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 MAN2B1O00754 1011 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 TBL1XO60907 577 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 CISD3P0C7P0 127 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 RARAP10276 462 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 SLC6A11P48066 632 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 GALK1P51570 392 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 TAS2R40P59535 323 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 CA9Q16790 459 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 HADHQ16836 314 aaKnown RBP13.26□□□□□ -0.29
TCOF1-210ENST00000506767 MIA3Q5JRA6 1907 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 RABGAP1LQ5R372 815 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 TTC39BQ5VTQ0 682 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-210ENST00000506767 NAIF1Q69YI7 327 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-210ENST00000506767 C11orf63Q6NUN7 778 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 TPRG1Q6ZUI0 275 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 ZNF687Q8N1G0 1237 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 DOCK4Q8N1I0 1966 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 CFAP52Q8N1V2 620 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 RNF10Q8N5U6 811 aaKnown RBP13.26□□□□□ -0.29
TCOF1-210ENST00000506767 SHDQ96IW2 340 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
TCOF1-210ENST00000506767 SLC2A11Q9BYW1 496 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 TSGA10Q9BZW7 698 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 CLEC4EQ9ULY5 219 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 PPP2R2CQ9Y2T4 447 aa13.26□□□□□ -0.29
TCOF1-210ENST00000506767 KRT86O43790 486 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 TULP3O75386 442 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 LRIG2O94898 1065 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 COMTP21964 271 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 HOXC13P31276 330 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 IRAK1P51617 712 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 ARSEP51690 589 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 DPYSL2Q16555 572 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 ALFQ53S48 1182 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 TMEM196Q5HYL7 178 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms