RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TRPC4APQ8TEL6 797 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF526Q8TF50 670 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 XPNPEP3Q9NQH7 507 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 TMEM216Q9P0N5 145 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 RGSL1A5PLK6 1076 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 H6PDO95479 791 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 MYCLP12524 364 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 PIK3R1P27986 724 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 TGFB2P61812 414 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 FKBP1AP62942 108 aaKnown RBP17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 CEACAM7Q14002 265 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 STEAP4Q687X5 459 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 ELMSAN1Q6PJG2 1045 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 UNC5BQ8IZJ1 945 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF781Q8N8C0 355 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 MAPK15Q8TD08 544 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 ATP6V0A1Q93050 837 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 SLC35B4Q969S0 331 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF512Q96ME7 567 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 CAMKK2Q96RR4 588 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 FERMT1Q9BQL6 677 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 RNPEPQ9H4A4 650 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF711Q9Y462 761 aa17.55■□□□□ 0.4
SQSTM1-211ENST00000506690 TBC1D12O60347 775 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 BCAS2O75934 225 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 TPSB2P20231 275 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 MSX2P35548 267 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 SERPINB5P36952 375 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 CAP2P40123 477 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 ENTPD1P49961 510 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 AP3M2P53677 418 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 EN1Q05925 392 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 MPP3Q13368 585 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 PPP2R5DQ14738 602 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 CYTH1Q15438 398 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 TPSAB1Q15661 275 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 SEZ6Q53EL9 994 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 DACT2Q5SW24 774 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 SNX32Q86XE0 403 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 KLHL32Q96NJ5 620 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 OR52B2Q96RD2 323 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 TARS2Q9BW92 718 aaKnown RBP17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 OXCT2Q9BYC2 517 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 ASNSD1Q9NWL6 643 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 SLC17A6Q9P2U8 582 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 EPS15L1Q9UBC2 864 aa17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 BARX2Q9UMQ3 279 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-211ENST00000506690 C7orf72A4D263 438 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 CBFA2T3O75081 653 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 METTL18O95568 372 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 TGM2P21980 687 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 IL4RP24394 825 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 EPHA3P29320 983 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 NUP107P57740 925 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 PDAP1Q13442 181 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 MGAT5BQ3V5L5 792 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 PPM1LQ5SGD2 360 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 STRIP1Q5VSL9 837 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 CARM1Q86X55 608 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 LZTR1Q8N653 840 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 RP9Q8TA86 221 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 PDCD6IPQ8WUM4 868 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF597Q96LX8 424 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 GCOM2Q9BZD3 368 aaPredicted RBP17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 PICK1Q9NRD5 415 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 INIPQ9NRY2 104 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 FBXO40Q9UH90 709 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 SEPT9Q9UHD8 586 aaPredicted RBP17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 SCN4AP35499 1836 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 H3BNH8 94 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 RNASEH2AO75792 299 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 CHRNA5P30532 468 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 TUBA4AP68366 448 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 SH3PXD2AQ5TCZ1 1133 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 C4orf22Q6V702 233 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 NCCRP1Q6ZVX7 275 aaPredicted RBP17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 WDR49Q8IV35 697 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 PGAM4Q8N0Y7 254 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 PQLC3Q8N755 202 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 TTLL6Q8N841 843 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 MCRS1Q96EZ8 462 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 MTMR12Q9C0I1 747 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 PDZD7Q9H5P4 517 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 TCF7L2Q9NQB0 619 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 HEY1Q9Y5J3 304 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 SCN9AQ15858 1988 aa17.53■□□□□ 0.4
SQSTM1-211ENST00000506690 ZNF646O15015 1829 aaPredicted RBP17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 TESPA1A2RU30 521 aaPredicted RBP17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 ACOT8O14734 319 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 EDN1P05305 212 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 ME2P23368 584 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 GRIA1P42261 906 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 PHKA2P46019 1235 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 ACADVLP49748 655 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 PPM1JQ5JR12 505 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 ANKRD23Q86SG2 305 aa17.52■□□□□ 0.4
SQSTM1-211ENST00000506690 PDCD2LQ9BRP1 358 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms