RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 EZH2Q15910 746 aaKnown RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 FAM110CQ1W6H9 321 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 TBRG1Q3YBR2 411 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 GLE1Q53GS7 698 aaKnown RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 MORN5Q5VZ52 161 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 ANKRD40Q6AI12 368 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 DGAT2L7PQ6IED9 249 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 MIS18BP1Q6P0N0 1132 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 TMEM88Q6PEY1 159 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 RINLQ6ZS11 566 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 RTL10Q7L3V2 364 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 C1QL2Q7Z5L3 287 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 ADGRF3Q8IZF5 1079 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 GALNT15Q8N3T1 639 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 OR52N4Q8NGI2 321 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 BCAS4Q8TDM0 211 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 HMGB4Q8WW32 186 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 THAP4Q8WY91 577 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 LTV1Q96GA3 475 aaPredicted RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 GPR78Q96P69 363 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 ISCA1Q9BUE6 129 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 MYLK2Q9H1R3 596 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 ELAC1Q9H777 363 aaKnown RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 G6PC2Q9NQR9 355 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 ARL8BQ9NVJ2 186 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 NDUFAF4Q9P032 175 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 RAB21Q9UL25 225 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 TRPC5Q9UL62 973 aaPredicted RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 SLC12A4Q9UP95 1085 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 BTBD3Q9Y2F9 522 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 HEMK1Q9Y5R4 338 aaPredicted RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 EMSYQ7Z589 1322 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SLC22A23A1A5C7 686 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 DNAJC9-AS1A6NH13 148 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 C2CD4BA6NLJ0 364 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 DSCR3O14972 297 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 PEPDP12955 493 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 ST6GAL1P15907 406 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 TGM2P21980 687 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 KELP23276 732 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SERPINA4P29622 427 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 GRK5P34947 590 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 PRKAA2P54646 552 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SRSF1Q07955 248 aaKnown RBP eCLIP3.27□□□□□ -1.89
GYPB-207ENST00000506679 SMAD1Q15797 465 aaKnown RBP3.27□□□□□ -1.89
GYPB-207ENST00000506679 EARS2Q5JPH6 523 aaKnown RBP3.27□□□□□ -1.89
GYPB-207ENST00000506679 ZNF626Q68DY1 528 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 ANO7Q6IWH7 933 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 RHPN2Q8IUC4 686 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 CCDC117Q8IWD4 279 aaPredicted RBP3.27□□□□□ -1.89
GYPB-207ENST00000506679 PAQR4Q8N4S7 273 aaPredicted RBP3.27□□□□□ -1.89
GYPB-207ENST00000506679 ADPRHL1Q8NDY3 354 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SRFBP1Q8NEF9 429 aaKnown RBP3.27□□□□□ -1.89
GYPB-207ENST00000506679 OR6Y1Q8NGX8 325 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SPPL3Q8TCT6 385 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 CLEC4CQ8WTT0 213 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 CPT1BQ92523 772 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 ATP2A3Q93084 1043 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SDCCAG3Q96C92 435 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 COQ8BQ96D53 544 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SIGLEC11Q96RL6 698 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 HERPUD2Q9BSE4 406 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 C1QTNF7Q9BXJ2 289 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 TXNRD2Q9NNW7 524 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 SLC22A11Q9NSA0 550 aa3.27□□□□□ -1.89
GYPB-207ENST00000506679 COPG1Q9Y678 874 aaKnown RBP3.27□□□□□ -1.89
GYPB-207ENST00000506679 MORC2Q9Y6X9 1032 aaPredicted RBP3.27□□□□□ -1.89
GYPB-207ENST00000506679 TPD52L2O43399 206 aaKnown RBP3.26□□□□□ -1.89
GYPB-207ENST00000506679 EIF3JO75822 258 aaKnown RBP3.26□□□□□ -1.89
GYPB-207ENST00000506679 TFRCP02786 760 aaKnown RBP3.26□□□□□ -1.89
GYPB-207ENST00000506679 DHRS4L1P0CG22 281 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 CTSAP10619 480 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 ARHGAP25P42331 645 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 HALP42357 657 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 MCM2P49736 904 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 RCAN1P53805 252 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 RPS13P62277 151 aaKnown RBP3.26□□□□□ -1.89
GYPB-207ENST00000506679 SHC2P98077 582 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 GHRHRQ02643 423 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 PRKG1Q13976 671 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 INO80DQ53TQ3 878 aaPredicted RBP3.26□□□□□ -1.89
GYPB-207ENST00000506679 MTX3Q5HYI7 312 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 ZNF569Q5MCW4 686 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 ANO1Q5XXA6 986 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 LDHAL6AQ6ZMR3 332 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 MDGA2Q7Z553 956 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 PIP4P1Q86T03 277 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 SUGP1Q8IWZ8 645 aaKnown RBP3.26□□□□□ -1.89
GYPB-207ENST00000506679 UEVLDQ8IX04 471 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 C16orf71Q8IYS4 520 aaPredicted RBP3.26□□□□□ -1.89
GYPB-207ENST00000506679 SPATA5Q8NB90 893 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 PIGOQ8TEQ8 1089 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 PIGKQ92643 395 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 TRAPPC9Q96Q05 1148 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 ZNF347Q96SE7 839 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 HTATIP2Q9BUP3 242 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 TRIM2Q9C040 744 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 ARHGAP39Q9C0H5 1083 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 SFXN1Q9H9B4 322 aa3.26□□□□□ -1.89
GYPB-207ENST00000506679 PRDM16Q9HAZ2 1276 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms