RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PDE4DIPQ5VU43 2346 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 COL4A4P53420 1690 aaPredicted RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 BPTFQ12830 3046 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 TBKBP1A7MCY6 615 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 ADAM12O43184 909 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 IRAK2O43187 625 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 IGLV3-25P01717 112 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 F7P08709 466 aaPredicted RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 EIF4EBP2Q13542 120 aaPredicted RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 BTBD8Q5XKL5 378 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 TADA2BQ86TJ2 420 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 CRIPAKQ8N1N5 446 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 DCAKDQ8WVC6 231 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 ZNF419Q96HQ0 510 aaPredicted RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 SIGLEC10Q96LC7 697 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 STMN4Q9H169 189 aaPredicted RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 TRABDQ9H4I3 376 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 RPL17P18621 184 aaKnown RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 GEMIN4P57678 1058 aaKnown RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 SLC20A2Q08357 652 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 ZBTB17Q13105 803 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 RWDD4Q6NW29 188 aaKnown RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 C4orf50Q6ZRC1 276 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 C14orf80Q86SX3 495 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 FTHL17Q9BXU8 183 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 GMIPQ9P107 970 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 MAGED2Q9UNF1 606 aaPredicted RBP12.56□□□□□ -0.4
LIN54-206ENST00000506560 MAD1L1Q9Y6D9 718 aa12.56□□□□□ -0.4
LIN54-206ENST00000506560 TMEM189-UBE2V1I3L0A0 370 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 PAGE1O75459 146 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 MAGEA6P43360 314 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 BFSP2Q13515 415 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 MAPRE1Q15691 268 aaKnown RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 UNC5AQ6ZN44 842 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 CEP128Q6ZU80 1094 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 MZB1Q8WU39 189 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 VWCEQ96DN2 955 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 CHMP6Q96FZ7 201 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 DHRS4Q9BTZ2 278 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 ZC3H7BQ9UGR2 993 aaKnown RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 CDH23Q9H251 3354 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 A6NNZ2 444 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 CCL5P13501 91 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 PTPN3P26045 913 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 RPA3P35244 121 aaPredicted RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 MAGEA3P43357 314 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 SESN2P58004 480 aaPredicted RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 SEMA5AQ13591 1074 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 PDK1Q15118 436 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 ZKSCAN8Q15776 578 aaPredicted RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 SPRED3Q2MJR0 410 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 TUBB8Q3ZCM7 444 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 CES3Q6UWW8 571 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 RNF19BQ6ZMZ0 732 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 PID1Q7Z2X4 250 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 TDRPQ86YL5 185 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 USP33Q8TEY7 942 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 CENPTQ96BT3 561 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 PAIP2Q9BPZ3 127 aaKnown RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 UBP1Q9NZI7 540 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 MPP6Q9NZW5 540 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 KANSL3Q9P2N6 904 aa12.55□□□□□ -0.4
LIN54-206ENST00000506560 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
LIN54-206ENST00000506560 EBAG9O00559 213 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 GALTP07902 379 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 KRT4P19013 534 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 FOXN2P32314 431 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 CD68P34810 354 aaPredicted RBP12.54□□□□□ -0.4
LIN54-206ENST00000506560 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 SLC1A5Q15758 541 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 TRIM60Q495X7 471 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 FUT10Q6P4F1 479 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 DYDC1Q8WWB3 177 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 APOL2Q9BQE5 337 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 LRFN2Q9ULH4 789 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
LIN54-206ENST00000506560 WDR27A2RRH5 827 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 ZBTB24O43167 697 aaPredicted RBP12.54□□□□□ -0.4
LIN54-206ENST00000506560 VIMP08670 466 aaKnown RBP12.54□□□□□ -0.4
LIN54-206ENST00000506560 CPB1P15086 417 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 GLUD2P49448 558 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 TLE2Q04725 743 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 MRPL58Q14197 206 aaKnown RBP12.54□□□□□ -0.4
LIN54-206ENST00000506560 ARL13BQ3SXY8 428 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 CPLX4Q7Z7G2 160 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 CTAGE3PQ8IX95 158 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 SEPT8Q92599 483 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 SERAC1Q96JX3 654 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 FCRL2Q96LA5 508 aaPredicted RBP12.54□□□□□ -0.4
LIN54-206ENST00000506560 SEPT5Q99719 369 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms