RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 BRD8Q9H0E9 1235 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 CDH19Q9H159 772 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 LHX5Q9H2C1 402 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 CLK4Q9HAZ1 481 aaKnown RBP16.31■□□□□ 0.2
SCLT1-208ENST00000506368 PFDN4Q9NQP4 134 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
SCLT1-208ENST00000506368 MOCS1Q9NZB8 636 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 LOC100653049A0A140TA62 436 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 BCLAF3A2AJT9 711 aaKnown RBP16.31■□□□□ 0.2
SCLT1-208ENST00000506368 TRPA1O75762 1119 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 KRT34O76011 436 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 ALDH1A2O94788 518 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 RALBP11234 206 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 TGM2P21980 687 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 GJA8P48165 433 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 LIG4P49917 911 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 RPL10AP62906 217 aaKnown RBP16.31■□□□□ 0.2
SCLT1-208ENST00000506368 GHRHRQ02643 423 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 C16orf72Q14CZ0 275 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 GPR141Q7Z602 305 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 TMEM102Q8N9M5 508 aaPredicted RBP16.31■□□□□ 0.2
SCLT1-208ENST00000506368 HIPK3Q9H422 1215 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 COPS7BQ9H9Q2 264 aaPredicted RBP16.31■□□□□ 0.2
SCLT1-208ENST00000506368 COPG2Q9UBF2 871 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 EMCNQ9ULC0 261 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 AP4S1Q9Y587 144 aa16.31■□□□□ 0.2
SCLT1-208ENST00000506368 A0A087WXM4 84 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 IQCA1LA6NCM1 817 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 TMEM247A6NEH6 219 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 SOBPA7XYQ1 873 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 ADCY6O43306 1168 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 LYPLA1O75608 230 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-208ENST00000506368 ZNF26P17031 533 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-208ENST00000506368 IL1R2P27930 398 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 NUDT2P50583 147 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 YWHAEP62258 255 aaKnown RBP16.3■□□□□ 0.2
SCLT1-208ENST00000506368 MTMR2Q13614 643 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 KRT80Q6KB66 452 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 DSELQ8IZU8 1212 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 CPSF7Q8N684 471 aaKnown RBP16.3■□□□□ 0.2
SCLT1-208ENST00000506368 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 MID2Q9UJV3 735 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 DYTNA2CJ06 578 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 DGAT1O75907 488 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 PIGRP01833 764 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 RFC1P35251 1148 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-208ENST00000506368 ENTPD1P49961 510 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 NAA20P61599 178 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 CDKL1Q00532 357 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 TMEM62Q0P6H9 643 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 GRM1Q13255 1194 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 TKFCQ3LXA3 575 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 STEAP4Q687X5 459 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 GPR180Q86V85 440 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 TNIP2Q8NFZ5 429 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 EME1Q96AY2 570 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 DUS3LQ96G46 650 aaKnown RBP16.3■□□□□ 0.2
SCLT1-208ENST00000506368 ANKRD60Q9BZ19 345 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 PLAC1Q9HBJ0 212 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 PNPOQ9NVS9 261 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 GNPTGQ9UJJ9 305 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 AGO2Q9UKV8 859 aaKnown RBP16.3■□□□□ 0.2
SCLT1-208ENST00000506368 NUB1Q9Y5A7 615 aa16.3■□□□□ 0.2
SCLT1-208ENST00000506368 TRIM43BA6NCK2 446 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 H7C0C1 242 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 MED7O43513 233 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-208ENST00000506368 ATP5OP48047 213 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 PRKAA2P54646 552 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 MTMR1Q13613 665 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 SMTNL2Q2TAL5 461 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 GPAT2Q6NUI2 795 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 TMEM110Q86TL2 294 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 RSPH3Q86UC2 560 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 LILRA2Q8N149 483 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 PHTF2Q8N3S3 785 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 ELMO3Q96BJ8 720 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 SIGLEC10Q96LC7 697 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 LENG8Q96PV6 779 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-208ENST00000506368 PKP2Q99959 881 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 CORO1BQ9BR76 489 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 TCF7L2Q9NQB0 619 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 ASNSD1Q9NWL6 643 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
SCLT1-208ENST00000506368 IPO11Q9UI26 975 aaKnown RBP16.29■□□□□ 0.2
SCLT1-208ENST00000506368 COQ6Q9Y2Z9 468 aa16.29■□□□□ 0.2
SCLT1-208ENST00000506368 DDTLA6NHG4 134 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 KPNA7A9QM74 516 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 SLCO1B7G3V0H7 640 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 AVILO75366 819 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 TRUB2O95900 331 aaKnown RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 OATP04181 439 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 EIF2S1P05198 315 aaKnown RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 MLNP12872 115 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 PIK3R1P27986 724 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 HOXD12P35452 270 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 GARSP41250 739 aaKnown RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 PSMD8P48556 350 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms