RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 FTSJ1Q9UET6 329 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 CFAP47Q6ZTR5 3102 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 YJEFN3A6XGL0 299 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 E7ENQ6 273 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 PSMA7O14818 248 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 LTFP02788 710 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 ACSL1P33121 698 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 HNF1BP35680 557 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 RPS14P62263 151 aaKnown RBP21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 RACK1P63244 317 aaKnown RBP21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 COBLL1Q53SF7 1204 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 TMEM215Q68D42 235 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 LCLAT1Q6UWP7 414 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 DBX2Q6ZNG2 339 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 RBBP8NLQ8NC74 664 aaPredicted RBP21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 UBA3Q8TBC4 463 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 BIRC7Q96CA5 298 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 HSFY1Q96LI6 401 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 PPP1R9BQ96SB3 815 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 OMDQ99983 421 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 C6orf106Q9H6K1 298 aaPredicted RBP21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 IL21RQ9HBE5 538 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 PRSS16Q9NQE7 514 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 DKK4Q9UBT3 224 aa21.86■■□□□ 1.09
SQSTM1-210ENST00000506042 FRYQ5TBA9 3013 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 O00370 1275 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 ACSL4O60488 711 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 NNTQ13423 1086 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 KIF19Q2TAC6 998 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 PIK3R6Q5UE93 754 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 TMEM270Q6UE05 265 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 KIAA0907Q7Z7F0 614 aaPredicted RBP21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 ADIPOR2Q86V24 386 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 SMARCE1Q969G3 411 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 EEF2KMTQ96G04 330 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 SLC12A6Q9UHW9 1150 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 CLEC4EQ9ULY5 219 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 PCDHB4Q9Y5E5 795 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 SNX11Q9Y5W9 270 aa21.85■■□□□ 1.09
SQSTM1-210ENST00000506042 IGF2RP11717 2491 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 GOLGA8CPA6NN73 597 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 M0QYV0 167 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 CAPN9O14815 690 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 APOEP02649 317 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 SRPRAP08240 638 aaKnown RBP21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 C7P10643 843 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 ABCB4P21439 1286 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 ACADSBP45954 432 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 CNGA2Q16280 664 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 CCDC40Q4G0X9 1142 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 CBWD6Q4V339 395 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 CBWD3Q5JTY5 395 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 CBWD5Q5RIA9 395 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 KIAA0895LQ68EN5 471 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 SLCO6A1Q86UG4 719 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 PDCD7Q8N8D1 485 aaKnown RBP21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 C1orf216Q8TAB5 229 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 FIBINQ8TAL6 211 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 BAHD1Q8TBE0 780 aaPredicted RBP21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 RSPH9Q9H1X1 276 aaPredicted RBP21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 SCUBE2Q9NQ36 999 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 FBXL12Q9NXK8 326 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 STIM2Q9P246 746 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 FZD4Q9ULV1 537 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 GPSM3Q9Y4H4 160 aa21.84■■□□□ 1.09
SQSTM1-210ENST00000506042 TARSL2A2RTX5 802 aaKnown RBP21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 FAM47DPA6NHR8 397 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 MSI1O43347 362 aaKnown RBP21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 PRCPP42785 496 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 ARRB1P49407 418 aaPredicted RBP21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 OXCT1P55809 520 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 PPM1KQ8N3J5 372 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 OXR1Q8N573 874 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 ZNF366Q8N895 744 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 PABPC3Q9H361 631 aaKnown RBP21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 TJP2Q9UDY2 1190 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 TLR6Q9Y2C9 796 aa21.83■■□□□ 1.09
SQSTM1-210ENST00000506042 EDDM13A0A1B0GTR0 161 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 VILLO15195 856 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 P4HA2O15460 535 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 MAGEC1O60732 1142 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 ADH1BP00325 375 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 LRMPQ12912 555 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 MTA1Q13330 715 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 HNRNPA1L2Q32P51 320 aaKnown RBP21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 DSG4Q86SJ6 1040 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 SMYD4Q8IYR2 804 aaPredicted RBP21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 CARNMT1Q8N4J0 409 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 NDRG1Q92597 394 aaKnown RBP21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 FAM149B1Q96BN6 582 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 CEP63Q96MT8 703 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 AASDHPPTQ9NRN7 309 aa21.82■■□□□ 1.08
SQSTM1-210ENST00000506042 TAF4O00268 1085 aa21.81■■□□□ 1.08
SQSTM1-210ENST00000506042 TULP2O00295 520 aa21.81■■□□□ 1.08
SQSTM1-210ENST00000506042 PAPSS1O43252 624 aaPredicted RBP21.81■■□□□ 1.08
SQSTM1-210ENST00000506042 MED7O43513 233 aa21.81■■□□□ 1.08
SQSTM1-210ENST00000506042 IGLV3-27P01718 113 aa21.81■■□□□ 1.08
SQSTM1-210ENST00000506042 ITGAVP06756 1048 aa21.81■■□□□ 1.08
SQSTM1-210ENST00000506042 C1SP09871 688 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms