RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 TCRBV5S1A1TA0A578 114 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 MANSC4A6NHS7 340 aaPredicted RBP6.5□□□□□ -1.37
NIPBL-205ENST00000505998 PRAMEF2O60811 474 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 MMP8P22894 467 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 PROK1P58294 105 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 KRT72Q14CN4 511 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 TRIM71Q2Q1W2 868 aaKnown RBP6.5□□□□□ -1.37
NIPBL-205ENST00000505998 CCDC38Q502W7 563 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 PIK3AP1Q6ZUJ8 805 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 KRT27Q7Z3Y8 459 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 SIN3AQ96ST3 1273 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 RMDN3Q96TC7 470 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 ARPC5LQ9BPX5 153 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 RXFP3Q9NSD7 469 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 LRFN1Q9P244 771 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 VPS4AQ9UN37 437 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 PCDHB2Q9Y5E7 798 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 FAM135BQ49AJ0 1406 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 TOPAZ1Q8N9V7 1692 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 QRICH2Q9H0J4 1663 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 TONSLQ96HA7 1378 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 CLIC1O00299 241 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 SYT5O00445 386 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 FYB1O15117 783 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 CTIFO43310 598 aaKnown RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 DHHO43323 396 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 TAF5LO75529 589 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 CSTBP04080 98 aaKnown RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 ITGA5P08648 1049 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 CHRM5P08912 532 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 NHLRC4P0CG21 123 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 AKT1P31749 480 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 GALNSP34059 522 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 TUBA4AP68366 448 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 TFF2Q03403 129 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 GALNT1Q10472 559 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 KCNB1Q14721 858 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 MFSD13AQ14CX5 517 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 LARS2Q15031 903 aaKnown RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 RINT1Q6NUQ1 792 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 VSTM1Q6UX27 236 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 CHSY1Q86X52 802 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 NRSN1Q8IZ57 195 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 SEMA6DQ8NFY4 1073 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 WDR60Q8WVS4 1066 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 LTV1Q96GA3 475 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 RITA1Q96K30 269 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 ASB2Q96Q27 587 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 ADGRE3Q9BY15 652 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 GAR1Q9NY12 217 aaKnown RBP6.49□□□□□ -1.37
NIPBL-205ENST00000505998 FZD4Q9ULV1 537 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 PTPRUQ92729 1446 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 NCOA3Q9Y6Q9 1424 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 ADGRF5Q8IZF2 1346 aa6.49□□□□□ -1.37
NIPBL-205ENST00000505998 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-205ENST00000505998 ABCC11Q96J66 1382 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 LINC01548A6NM66 108 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 TISP43B9A030 160 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 H3BNC9 293 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 IFRD1O00458 451 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-205ENST00000505998 DNPH1O43598 174 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 PRKCGP05129 697 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 CD38P28907 300 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 IGHMBP2P38935 993 aaKnown RBP6.48□□□□□ -1.37
NIPBL-205ENST00000505998 TRAPPC10P48553 1259 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 JAK3P52333 1124 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 RAE1P78406 368 aaKnown RBP6.48□□□□□ -1.37
NIPBL-205ENST00000505998 GRM4Q14833 912 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 MSANTD2Q6P1R3 559 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 CCDC174Q6PII3 467 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 EXOC8Q8IYI6 725 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 TP63Q9H3D4 680 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-205ENST00000505998 FBXO28Q9NVF7 368 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 DACT1Q9NYF0 836 aa6.48□□□□□ -1.37
NIPBL-205ENST00000505998 SCAF8Q9UPN6 1271 aaKnown RBP6.48□□□□□ -1.37
NIPBL-205ENST00000505998 YTHDC2Q9H6S0 1430 aaKnown RBP6.48□□□□□ -1.37
NIPBL-205ENST00000505998 FMN2Q9NZ56 1722 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 LRPPRCP42704 1394 aaKnown RBP6.47□□□□□ -1.37
NIPBL-205ENST00000505998 LOC102724159A0A0B4J2E5 919 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 PRRT4C9JH25 899 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 TMEM232C9JQI7 657 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 TRIM38O00635 465 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 FCHO1O14526 889 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 ITGA2BP08514 1039 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 ALADP13716 330 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 KLRK1P26718 216 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 SERPINF1P36955 418 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 SLC10A2Q12908 348 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-205ENST00000505998 PWP2Q15269 919 aaKnown RBP6.47□□□□□ -1.37
NIPBL-205ENST00000505998 PDCD2Q16342 344 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-205ENST00000505998 FAM83BQ5T0W9 1011 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 SLC22A17Q8WUG5 538 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 EID2BQ96D98 161 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 KAZALD1Q96I82 304 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 UBE2J1Q9Y385 318 aaPredicted RBP6.47□□□□□ -1.37
NIPBL-205ENST00000505998 DCCP43146 1447 aa6.47□□□□□ -1.37
NIPBL-205ENST00000505998 METP08581 1390 aa6.46□□□□□ -1.37
NIPBL-205ENST00000505998 MYOM1P52179 1685 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms