RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 SIX2Q9NPC8 291 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 ABCB8Q9NUT2 735 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 POLR3BQ9NW08 1133 aaPredicted RBP12.43□□□□□ -0.42
PRDM2-214ENST00000505823 DDIT4Q9NX09 232 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 CACNA2D2Q9NY47 1150 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 DLL3Q9NYJ7 618 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRDM2-214ENST00000505823 KIAA1522Q9P206 1035 aaPredicted RBP12.43□□□□□ -0.42
PRDM2-214ENST00000505823 STIM2Q9P246 746 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 SUSD2Q9UGT4 822 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 INVSQ9Y283 1065 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 FHOD1Q9Y613 1164 aa12.43□□□□□ -0.42
PRDM2-214ENST00000505823 SPAG17Q6Q759 2223 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 ANKRD62A6NC57 917 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 KCNU1A8MYU2 1149 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 DCLK1O15075 740 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 DLDP09622 509 aaKnown RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 GABRG2P18507 467 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 LIMK1P53667 647 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 ATXN3P54252 364 aaPredicted RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 POLR2FP61218 127 aaKnown RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SULT2A1Q06520 285 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 GEN1Q17RS7 908 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 ZC3H12AQ5D1E8 599 aaKnown RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 MS4A13Q5J8X5 152 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 DAB2IPQ5VWQ8 1189 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 PPP1R2P3Q6NXS1 205 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 RFWD3Q6PCD5 774 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SLC26A9Q7LBE3 791 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 TAC4Q86UU9 113 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SYT12Q8IV01 421 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SFTPA1Q8IWL2 248 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 LGI2Q8N0V4 545 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 DEFB106AQ8N104 65 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 ZNF397Q8NF99 534 aaPredicted RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 PIGKQ92643 395 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 RMDN1Q96DB5 314 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SIPA1Q96FS4 1042 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SLC39A13Q96H72 371 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 FCRL2Q96LA5 508 aaPredicted RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 SLC2A13Q96QE2 648 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 CPXM1Q96SM3 734 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 ZDHHC4Q9NPG8 344 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 ACP6Q9NPH0 428 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 FAM207AQ9NSI2 230 aaPredicted RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 CALCOCO1Q9P1Z2 691 aa12.42□□□□□ -0.42
PRDM2-214ENST00000505823 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.42□□□□□ -0.42
PRDM2-214ENST00000505823 MYO18AQ92614 2054 aaKnown RBP12.41□□□□□ -0.42
PRDM2-214ENST00000505823 SDK1Q7Z5N4 2213 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 A0A1W2PQF6 199 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 F8VZ95 297 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 M0QYT0 321 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 SLC30A4O14863 429 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 DAB1O75553 588 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 LUC7L3O95232 432 aaKnown RBP12.41□□□□□ -0.42
PRDM2-214ENST00000505823 FYNP06241 537 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 TACR2P21452 398 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 CDH5P33151 784 aaPredicted RBP12.41□□□□□ -0.42
PRDM2-214ENST00000505823 MATKP42679 507 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 COPB1P53618 953 aaKnown RBP12.41□□□□□ -0.42
PRDM2-214ENST00000505823 RNASE9P60153 205 aaKnown RBP12.41□□□□□ -0.42
PRDM2-214ENST00000505823 APBA1Q02410 837 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 ZBTB16Q05516 673 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 TYRO3Q06418 890 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 KCNMA1Q12791 1236 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 NME3Q13232 169 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 ZNF234Q14588 700 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 MAP7D1Q3KQU3 841 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 BRMS1LQ5PSV4 323 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 TAF3Q5VWG9 929 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 MBLAC2Q68D91 279 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 FAM183BPQ6ZVS7 135 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 TMPRSS6Q8IU80 811 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 KDM1BQ8NB78 822 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 RLN3Q8WXF3 142 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 ACOX2Q99424 681 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 NUP58Q9BVL2 599 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 WDCPQ9H6R7 721 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 PARD6AQ9NPB6 346 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 LIMA1Q9UHB6 759 aaKnown RBP12.41□□□□□ -0.42
PRDM2-214ENST00000505823 SCML1Q9UN30 329 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 NCKAP1Q9Y2A7 1128 aa12.41□□□□□ -0.42
PRDM2-214ENST00000505823 FRYLO94915 3013 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 RALGAPA1Q6GYQ0 2036 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.4□□□□□ -0.42
PRDM2-214ENST00000505823 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 LGALS16A8MUM7 142 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 GRAP2O75791 330 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 GFPT2O94808 682 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 DNTTP04053 509 aa12.4□□□□□ -0.42
PRDM2-214ENST00000505823 SRPRAP08240 638 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms