RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 ABHD16BQ9H3Z7 469 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 PRDM16Q9HAZ2 1276 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 MLXIPLQ9NP71 852 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 PDGFCQ9NRA1 345 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 NDUFAF4Q9P032 175 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 LUZP4Q9P127 313 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 MAFFQ9ULX9 164 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 FAM90A20PA6NIJ5 464 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 PPP6CO00743 305 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 RNF8O76064 485 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 ALDOAP04075 364 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 TUBB4AP04350 444 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 RFPL3SP0C7P2 107 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 AARSP49588 968 aaKnown RBP eCLIP4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 RCAN1P53805 252 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 SHC2P98077 582 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 SLC10A2Q12908 348 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 PPFIA1Q13136 1202 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 LRRC24Q50LG9 513 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 MIS18BP1Q6P0N0 1132 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 KIAA1324Q6UXG2 1013 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 SYNE3Q6ZMZ3 975 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 OSR1Q8TAX0 266 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 MAP4K1Q92918 833 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 TM2D2Q9BX73 214 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 QTRT1Q9BXR0 403 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 CHODLQ9H9P2 273 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 KLHL13Q9P2N7 655 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 BAG5Q9UL15 447 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 RCE1Q9Y256 329 aa4.55□□□□□ -1.68
TOPBP1-204ENST00000505804 CYP3A7-CYP3A51PA0A087WV96 503 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 MBD3L5A6NJ08 208 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 C3orf70A6NLC5 250 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 IRAK2O43187 625 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 CYP3A7P24462 503 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 CD38P28907 300 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 TACR3P29371 465 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 RBM5P52756 815 aaKnown RBP eCLIP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 DMWDQ09019 674 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 FOXF2Q12947 444 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 MTA1Q13330 715 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 DCTN1Q14203 1278 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF268Q14587 947 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 SMAD1Q15797 465 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 ANKRD45Q5TZF3 282 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 DGAT2L7PQ6IED9 249 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 DHRS13Q6UX07 377 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 RFX8Q6ZV50 586 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF354CQ86Y25 554 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 RFX6Q8HWS3 928 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 PIGKQ92643 395 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 P2RY11Q96G91 374 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 FCRL5Q96RD9 977 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 ABHD14AQ9BUJ0 271 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 TRIM2Q9C040 744 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 OSBPL5Q9H0X9 879 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 SFXN1Q9H9B4 322 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 FLRT1Q9NZU1 646 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 FEM1BQ9UK73 627 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 COPG1Q9Y678 874 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 DGKBQ9Y6T7 804 aa4.54□□□□□ -1.68
TOPBP1-204ENST00000505804 SPATA31A5Q5VU36 1347 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 SPATA31A7Q8IWB4 1347 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 SMIM35A0A1B0GVV1 85 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 CGB1A6NKQ9 187 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 MASP2O00187 686 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 DSCR3O14972 297 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 CNTN5O94779 1100 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 PLAUP00749 431 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 ALDOCP09972 364 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 ST6GAL1P15907 406 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 IGFBP2P18065 325 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 RXRAP19793 462 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 CERS1P27544 350 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 PCP4P48539 62 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 SRSF4Q08170 494 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 ADCK5Q3MIX3 580 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 ANXA2RQ3ZCQ2 193 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 GLE1Q53GS7 698 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 MEX3CQ5U5Q3 659 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 DPY19L2P1Q6NXN4 242 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 TMEM88Q6PEY1 159 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 RBM44Q6ZP01 1051 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 RINLQ6ZS11 566 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 RHPN2Q8IUC4 686 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 HERC6Q8IVU3 1022 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 UEVLDQ8IX04 471 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 ADGRF3Q8IZF5 1079 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 CPXCR1Q8N123 301 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 GALNT16Q8N428 558 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 SPPL3Q8TCT6 385 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 THAP4Q8WY91 577 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 SDCCAG3Q96C92 435 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 PIGSQ96S52 555 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 HTATIP2Q9BUP3 242 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 ARHGAP39Q9C0H5 1083 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 TWSG1Q9GZX9 223 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms