RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 PRSS16Q9NQE7 514 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 ABCB8Q9NUT2 735 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 RAB20Q9NX57 234 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 RABGEF1Q9UJ41 708 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 STOML2Q9UJZ1 356 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 TSPAN16Q9UKR8 245 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 CFAP45Q9UL16 551 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.11□□□□□ -1.43
GYPB-205ENST00000505583 ZNF510Q9Y2H8 683 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 RAXQ9Y2V3 346 aa6.11□□□□□ -1.43
GYPB-205ENST00000505583 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.11□□□□□ -1.43
GYPB-205ENST00000505583 ATRXP46100 2492 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 DOCK9Q9BZ29 2069 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 MYLKQ15746 1914 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 H0Y8X5 98 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 CBX4O00257 560 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 WNT9AO14904 365 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 XPO1O14980 1071 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 NPC1O15118 1278 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 CYBBP04839 570 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 IGHV4-34P06331 123 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 ZNF883P0CG24 379 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 KRT13P13646 458 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 OXTRP30559 389 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 GTF2H1P32780 548 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 RDXP35241 583 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 MXI1P50539 228 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 ZNF132P52740 706 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 PMS1P54277 932 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 CLDN6P56747 220 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 IL9RQ01113 521 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 ENPEPQ07075 957 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 ACAP1Q15027 740 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 PKDCCQ504Y2 493 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 MPPE1Q53F39 396 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 FAM133BQ5BKY9 247 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 PRAMEF14Q5SWL7 426 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 NADSYN1Q6IA69 706 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 KRBA2Q6ZNG9 492 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 MMS22LQ6ZRQ5 1243 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 CHST9Q7L1S5 443 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 TMPRSS7Q7RTY8 843 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 TADA2BQ86TJ2 420 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 PDZD3Q86UT5 571 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 UBR7Q8N806 425 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.1□□□□□ -1.43
GYPB-205ENST00000505583 OR2T3Q8NH03 318 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 CLEC4CQ8WTT0 213 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 UCMAQ8WVF2 138 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 PLD4Q96BZ4 506 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 TMA16Q96EY4 203 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 LMLNQ96KR4 655 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 CDK5RAP1Q96SZ6 601 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 UBXN6Q9BZV1 441 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 LHX5Q9H2C1 402 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 CCDC86Q9H6F5 360 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 EBF2Q9HAK2 575 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 TM9SF3Q9HD45 589 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 KIAA1522Q9P206 1035 aaPredicted RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 SERGEFQ9UGK8 458 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 GGA2Q9UJY4 613 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 INTS6Q9UL03 887 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 STRIP2Q9ULQ0 834 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 APOBEC2Q9Y235 224 aaKnown RBP6.1□□□□□ -1.43
GYPB-205ENST00000505583 VPS9D1Q9Y2B5 631 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 ANKRD6Q9Y2G4 727 aa6.1□□□□□ -1.43
GYPB-205ENST00000505583 COL5A1P20908 1838 aaPredicted RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 TRIM49BA6NDI0 452 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 TRABD2BA6NFA1 517 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 C10orf142B7Z368 130 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 RNF225M0QZC1 329 aaPredicted RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 O00370 1275 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 FLRT2O43155 660 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 TIMM44O43615 452 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 FSBPO95073 299 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 SEMA4FO95754 770 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 CER1O95813 267 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 IGLV3-27P01718 113 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 WNT1P04628 370 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 MYL1P05976 194 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 FYNP06241 537 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 ACADMP11310 421 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 PABPC1P11940 636 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 LCP1P13796 627 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 CD19P15391 556 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 TRIM21P19474 475 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 RPL13P26373 211 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 PRCPP42785 496 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 CTSOP43234 321 aaPredicted RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 CTSKP43235 329 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 HARS2P49590 506 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 NUMBP49757 651 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 RGS7P49802 495 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 AFF3P51826 1226 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 DAOAP59103 153 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 RPS24P62847 133 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 CYP4F3Q08477 520 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 LRMPQ12912 555 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 PNOCQ13519 176 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms