RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 C7P10643 843 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 HLA-EP13747 358 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 CD27P26842 260 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 GRK6P43250 576 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 ATRXP46100 2492 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 GRIA4P48058 902 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 TBX4P57082 545 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 DAOAP59103 153 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 CNGA2Q16280 664 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 PIK3R6Q5UE93 754 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 ANKRD40Q6AI12 368 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 TMEM270Q6UE05 265 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 DBX2Q6ZNG2 339 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 USP30Q70CQ3 517 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 KIAA0907Q7Z7F0 614 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 ADIPOR2Q86V24 386 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 CACUL1Q86Y37 369 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 SMYD4Q8IYR2 804 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 PNPLA1Q8N8W4 532 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 HJURPQ8NCD3 748 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 C1orf216Q8TAB5 229 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 SMARCE1Q969G3 411 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 IGSF8Q969P0 613 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 NT5C1BQ96P26 610 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 PRSS16Q9NQE7 514 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 TPX2Q9ULW0 747 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 FNDC3AQ9Y2H6 1198 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 PCDHB4Q9Y5E5 795 aa11.56□□□□□ -0.56
UBE2D3-219ENST00000505207 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 PMM2O15305 246 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 TNFSF14O43557 240 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 ACSL4O60488 711 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 FSBPO95073 299 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 LTFP02788 710 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 ACSL1P33121 698 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 CCT8P50990 548 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 C21orf59P57076 290 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 RPS14P62263 151 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 LRMPQ12912 555 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 PNOCQ13519 176 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 KIF19Q2TAC6 998 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 BHLHA9Q7RTU4 235 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 MFN1Q8IWA4 741 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 ZC3H3Q8IXZ2 948 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 KDM1BQ8NB78 822 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 FIBINQ8TAL6 211 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 SLC35F5Q8WV83 523 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 DHTKD1Q96HY7 919 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 CEP63Q96MT8 703 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 SERPINB11Q96P15 392 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 GOLPH3LQ9H4A5 285 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 C6orf106Q9H6K1 298 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 IL21RQ9HBE5 538 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 TM9SF3Q9HD45 589 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 ANKRD6Q9Y2G4 727 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 ZDHHC9Q9Y397 364 aa11.55□□□□□ -0.56
UBE2D3-219ENST00000505207 PKD1L2Q7Z442 2459 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 TARSL2A2RTX5 802 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 LRRC72A6NJI9 287 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 M0QYV0 167 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 P4HA2O15460 535 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 MSI1O43347 362 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 PCDHGA12O60330 932 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 IGLV3-27P01718 113 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 CDK4P11802 303 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 NNMTP40261 264 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 ACADSBP45954 432 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 FMO5P49326 533 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 RGS7P49802 495 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 RACK1P63244 317 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 NUCB2P80303 420 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 NNTQ13423 1086 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 CDH18Q13634 790 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 PTPRNQ16849 979 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 CCDC40Q4G0X9 1142 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 PKDCCQ504Y2 493 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 KIAA0895LQ68EN5 471 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 TMPRSS7Q7RTY8 843 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 SLCO6A1Q86UG4 719 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 PPM1KQ8N3J5 372 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 SLC35C1Q96A29 364 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 TTC17Q96AE7 1141 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 BIRC7Q96CA5 298 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 ACE2Q9BYF1 805 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 RSPH9Q9H1X1 276 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 FBXL12Q9NXK8 326 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 STIM2Q9P246 746 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 SLC12A6Q9UHW9 1150 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 SNX11Q9Y5W9 270 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 AKAP13Q12802 2813 aa11.54□□□□□ -0.56
UBE2D3-219ENST00000505207 ANKRD11Q6UB99 2663 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 ZZEF1O43149 2961 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 CAPN9O14815 690 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 CAPNS1P04632 268 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 SRPRAP08240 638 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms