RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 BOLA3Q53S33 107 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 SNRNP25Q9BV90 132 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 SMG9Q9H0W8 520 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 C8orf33Q9H7E9 229 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ECT2Q9H8V3 914 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 PIDD1Q9HB75 910 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 TACR2P21452 398 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 MAPKAPK2P49137 400 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 AMPD2Q01433 879 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 EFEMP1Q12805 493 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 SLC12A1Q13621 1099 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 PDK2Q15119 407 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 C14orf80Q86SX3 495 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 RALGPS2Q86X27 583 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ARHGAP12Q8IWW6 846 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 PQLC3Q8N755 202 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ATP6V0D2Q8N8Y2 350 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 IRF7Q92985 503 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 IGSF8Q969P0 613 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 PCDH18Q9HCL0 1135 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ANAPC7Q9UJX3 599 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 MYO10Q9HD67 2058 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 CD160O95971 181 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 MBL2P11226 248 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 CDKN2BP42772 138 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 IRAK1P51617 712 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 DEUP1Q05D60 604 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 DHCR24Q15392 516 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 CA9Q16790 459 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 SETD3Q86TU7 594 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 C12orf40Q86WS4 652 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 PLPP6Q8IY26 295 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 RASAL2Q9UJF2 1139 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ALG6Q9Y672 507 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 BRWD1Q9NSI6 2320 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 TNFRSF4P43489 277 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 RPS9P46781 194 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 AUHQ13825 339 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 DMC1Q14565 340 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZC3H12AQ5D1E8 599 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 FBXL22Q6P050 247 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 EXD1Q8NHP7 514 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 GOLGA1Q92805 767 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 EDAQ92838 391 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 MRGPRX3Q96LB0 322 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 LUC7LQ9NQ29 371 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 ST7Q9NRC1 585 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 DDIT4Q9NX09 232 aa8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 DDX56Q9NY93 547 aaKnown RBP8.57□□□□□ -1.04
CDC42SE2-208ENST00000505065 SLC12A8A0AV02 714 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 E9PAM4 449 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 FGF10O15520 208 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 RHOQP17081 205 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 CDH4P55283 916 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 RUNX3Q13761 415 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 PAPD7Q5XG87 772 aaKnown RBP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 CWF19L1Q69YN2 538 aaKnown RBP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 ADIPOR2Q86V24 386 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZNF557Q8N988 423 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 RSAD2Q8WXG1 361 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 DESI2Q9BSY9 194 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 TKTL2Q9H0I9 626 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 USP27XA6NNY8 438 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 K7EQS6 105 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 GRAP2O75791 330 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 RARAP10276 462 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 COMTP21964 271 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 PSMA2P25787 234 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 AVPR1AP37288 418 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 KIR2DL1P43626 348 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 SPA17Q15506 151 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 CLUL1Q15846 466 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 SLC14A2Q15849 920 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 MPPE1Q53F39 396 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 TEX26Q8N6G2 289 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 OR52K2Q8NGK3 314 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 TLR10Q9BXR5 811 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 KRBA1A5PL33 1030 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 GOLGA6L9A6NEM1 432 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 MIF4GDA9UHW6 222 aaKnown RBP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 ZNF821O75541 412 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 ARSAP15289 507 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 CHKAP35790 457 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 IER5LQ5T953 404 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 TMEM215Q68D42 235 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 SYNPOQ8N3V7 929 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 RNF139Q8WU17 664 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 MAML1Q92585 1016 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 KXD1Q9BQD3 176 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 MAGEB5Q9BZ81 275 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 LINC00597Q9H2U6 94 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 WDCPQ9H6R7 721 aa8.56□□□□□ -1.04
CDC42SE2-208ENST00000505065 TMCO5BA8MYB1 307 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 GOLGA8SH3BPF8 625 aa8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 NARSO43776 548 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-208ENST00000505065 NFATC1O95644 943 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms