RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 R3HDM2Q9Y2K5 976 aaKnown RBP9.68□□□□□ -0.86
TPM3-218ENST00000505010 ASB3Q9Y575 518 aa9.68□□□□□ -0.86
TPM3-218ENST00000505010 SNX10Q9Y5X0 201 aa9.68□□□□□ -0.86
TPM3-218ENST00000505010 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 SLC12A8A0AV02 714 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 C2CD4DB7Z1M9 353 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 EEF2KO00418 725 aaKnown RBP9.67□□□□□ -0.86
TPM3-218ENST00000505010 APOL1O14791 398 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 RAD51CO43502 376 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 CREB3O43889 395 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 PAGE1O75459 146 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 TBX18O95935 607 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 APOEP02649 317 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 HMBSP08397 361 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 MYL4P12829 197 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 GOT1P17174 413 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 CHRNA3P32297 505 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 TPI1P60174 286 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 SNX1Q13596 522 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 KCNC3Q14003 757 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 TFDP2Q14188 446 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 PPP2R5DQ14738 602 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 ANGPT1Q15389 498 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 TRIP4Q15650 581 aaPredicted RBP9.67□□□□□ -0.86
TPM3-218ENST00000505010 CYP1B1Q16678 543 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 BRMS1LQ5PSV4 323 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 HECTD3Q5T447 861 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 BBS12Q6ZW61 710 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 HS6ST3Q8IZP7 471 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 C12orf50Q8NA57 414 aaPredicted RBP9.67□□□□□ -0.86
TPM3-218ENST00000505010 FAM71BQ8TC56 605 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 SLC22A17Q8WUG5 538 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 FCRL2Q96LA5 508 aaPredicted RBP9.67□□□□□ -0.86
TPM3-218ENST00000505010 CCDC114Q96M63 670 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 NECTIN4Q96NY8 510 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 CSPG4P5Q96PW8 444 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 RNF157Q96PX1 679 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 GCNAQ96QF7 691 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 LRRC1Q9BTT6 524 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 DCLK3Q9C098 648 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 EPC1Q9H2F5 836 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 PLEKHA4Q9H4M7 779 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.67□□□□□ -0.86
TPM3-218ENST00000505010 ARHGEF38Q9NXL2 777 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 TLR6Q9Y2C9 796 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 EFR3BQ9Y2G0 817 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 NCOR2Q9Y618 2525 aa9.67□□□□□ -0.86
TPM3-218ENST00000505010 DOCK4Q8N1I0 1966 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 SHROOM3Q8TF72 1996 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ZNF487B1APH4 448 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 I6L893 689 aaPredicted RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 DAPK3O43293 454 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 COCHO43405 550 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 RFPL2O75678 378 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ZMYND10O75800 440 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ASGR2P07307 311 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 SLC2A3P11169 496 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 PECAM1P16284 738 aaPredicted RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 AOC1P19801 751 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 GABRR2P28476 465 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ATP5C1P36542 298 aaKnown RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 COILP38432 576 aaPredicted RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 GGCXP38435 758 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 PPP3CCP48454 512 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 FNTAP49354 379 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 TUBP50607 506 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 CYP4F8P98187 520 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 SLC7A5Q01650 507 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 DR1Q01658 176 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 OTUD4Q01804 1114 aaKnown RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 NNTQ13423 1086 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 SNX30Q5VWJ9 437 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 TTC27Q6P3X3 843 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 C1orf228Q6PIY5 440 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ELMSAN1Q6PJG2 1045 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 CCDC137Q6PK04 289 aaKnown RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 VSIG1Q86XK7 387 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 CCDC105Q8IYK2 499 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 GPR161Q8N6U8 529 aaKnown RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 PQLC3Q8N755 202 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 PCDH19Q8TAB3 1148 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 CCDC26Q8TAB7 109 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 FAF2Q96CS3 445 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 SLC39A13Q96H72 371 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 RUNDC3BQ96NL0 473 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 EPAS1Q99814 870 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 CORO1BQ9BR76 489 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 SIK2Q9H0K1 926 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ADAM7Q9H2U9 754 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ANKZF1Q9H8Y5 726 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 IL21Q9HBE4 155 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 ASAH2Q9NR71 780 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 HOMER3Q9NSC5 361 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 TMEM51Q9NW97 253 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 RCOR3Q9P2K3 495 aaPredicted RBP9.66□□□□□ -0.86
TPM3-218ENST00000505010 LIMD1Q9UGP4 676 aa9.66□□□□□ -0.86
TPM3-218ENST00000505010 AMACRQ9UHK6 382 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms